Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
APOC4P55056 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
APOC4P55056 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
APOC4P55056 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
APOC4P55056 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
APOC4P55056 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
APOC4P55056 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
APOC4P55056 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
APOC4P55056 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC11.44□□□□□ -0.58
APOC4P55056 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC11.44□□□□□ -0.58
APOC4P55056 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
APOC4P55056 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
APOC4P55056 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC11.44□□□□□ -0.58
APOC4P55056 AMT-232ENST00000636199 1546 ntTSL 5 BASIC11.44□□□□□ -0.58
APOC4P55056 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
APOC4P55056 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
APOC4P55056 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
APOC4P55056 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
APOC4P55056 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
APOC4P55056 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
APOC4P55056 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
APOC4P55056 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
APOC4P55056 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
APOC4P55056 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC11.44□□□□□ -0.58
APOC4P55056 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
APOC4P55056 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
APOC4P55056 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC11.43□□□□□ -0.58
APOC4P55056 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
APOC4P55056 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
APOC4P55056 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
APOC4P55056 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
APOC4P55056 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
APOC4P55056 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
APOC4P55056 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC11.43□□□□□ -0.58
APOC4P55056 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
APOC4P55056 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
APOC4P55056 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
APOC4P55056 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC11.43□□□□□ -0.58
APOC4P55056 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
APOC4P55056 FRMD6-AS1-201ENST00000617151 2229 ntBASIC11.43□□□□□ -0.58
APOC4P55056 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC11.43□□□□□ -0.58
APOC4P55056 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
APOC4P55056 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
APOC4P55056 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
APOC4P55056 KCP-203ENST00000610776 5108 ntTSL 5 BASIC11.43□□□□□ -0.58
APOC4P55056 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
APOC4P55056 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
APOC4P55056 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
APOC4P55056 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
APOC4P55056 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
APOC4P55056 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
APOC4P55056 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
APOC4P55056 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
APOC4P55056 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
APOC4P55056 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC11.43□□□□□ -0.58
APOC4P55056 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC11.43□□□□□ -0.58
APOC4P55056 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC11.43□□□□□ -0.58
APOC4P55056 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC11.43□□□□□ -0.58
APOC4P55056 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
APOC4P55056 HNRNPA1P13-201ENST00000510646 963 ntBASIC11.43□□□□□ -0.58
APOC4P55056 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC11.43□□□□□ -0.58
APOC4P55056 FUZ-207ENST00000526575 482 ntTSL 4 BASIC11.43□□□□□ -0.58
APOC4P55056 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
APOC4P55056 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
APOC4P55056 RAB43P1-201ENST00000561790 589 ntBASIC11.43□□□□□ -0.58
APOC4P55056 AL359711.2-201ENST00000563105 872 ntBASIC11.43□□□□□ -0.58
APOC4P55056 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC11.43□□□□□ -0.58
APOC4P55056 MIR4313-201ENST00000580760 101 ntBASIC11.43□□□□□ -0.58
APOC4P55056 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC11.43□□□□□ -0.58
APOC4P55056 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
APOC4P55056 AC017083.2-201ENST00000608069 979 ntBASIC11.43□□□□□ -0.58
APOC4P55056 METTL26-214ENST00000614890 801 ntTSL 3 BASIC11.43□□□□□ -0.58
APOC4P55056 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC11.43□□□□□ -0.58
APOC4P55056 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
APOC4P55056 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
APOC4P55056 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
APOC4P55056 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
APOC4P55056 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC11.43□□□□□ -0.58
APOC4P55056 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
APOC4P55056 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
APOC4P55056 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
APOC4P55056 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
APOC4P55056 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
APOC4P55056 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
APOC4P55056 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC11.42□□□□□ -0.58
APOC4P55056 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC11.42□□□□□ -0.58
APOC4P55056 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC11.42□□□□□ -0.58
APOC4P55056 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC11.42□□□□□ -0.58
APOC4P55056 AL513523.2-202ENST00000427283 2040 ntBASIC11.42□□□□□ -0.58
APOC4P55056 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
APOC4P55056 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms