Protein–RNA interactions for Protein: P55008

AIF1, Allograft inflammatory factor 1, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AIF1P55008 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.04■□□□□ 0.16
AIF1P55008 AL442647.2-201ENST00000429864 857 ntBASIC16.04■□□□□ 0.16
AIF1P55008 GNAQP1-201ENST00000444815 1067 ntBASIC16.04■□□□□ 0.16
AIF1P55008 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
AIF1P55008 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.04■□□□□ 0.16
AIF1P55008 AC026410.3-201ENST00000514280 936 ntBASIC16.04■□□□□ 0.16
AIF1P55008 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.04■□□□□ 0.16
AIF1P55008 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.04■□□□□ 0.16
AIF1P55008 LINC02560-201ENST00000596379 459 ntBASIC16.04■□□□□ 0.16
AIF1P55008 AL049840.4-201ENST00000602422 811 ntBASIC16.04■□□□□ 0.16
AIF1P55008 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
AIF1P55008 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.04■□□□□ 0.16
AIF1P55008 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AIF1P55008 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
AIF1P55008 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
AIF1P55008 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
AIF1P55008 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.04■□□□□ 0.16
AIF1P55008 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
AIF1P55008 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
AIF1P55008 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
AIF1P55008 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
AIF1P55008 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AIF1P55008 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AIF1P55008 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
AIF1P55008 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AIF1P55008 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.03■□□□□ 0.16
AIF1P55008 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.03■□□□□ 0.16
AIF1P55008 DRD5P1-201ENST00000456605 1438 ntBASIC16.03■□□□□ 0.16
AIF1P55008 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
AIF1P55008 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.03■□□□□ 0.16
AIF1P55008 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AIF1P55008 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.03■□□□□ 0.16
AIF1P55008 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AIF1P55008 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
AIF1P55008 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.03■□□□□ 0.16
AIF1P55008 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AIF1P55008 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AIF1P55008 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AIF1P55008 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AIF1P55008 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
AIF1P55008 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
AIF1P55008 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
AIF1P55008 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
AIF1P55008 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AIF1P55008 AC004066.1-201ENST00000502488 802 ntBASIC16.03■□□□□ 0.16
AIF1P55008 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.03■□□□□ 0.16
AIF1P55008 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.03■□□□□ 0.16
AIF1P55008 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.03■□□□□ 0.16
AIF1P55008 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
AIF1P55008 RN7SL204P-201ENST00000582831 262 ntBASIC16.03■□□□□ 0.16
AIF1P55008 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.03■□□□□ 0.16
AIF1P55008 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.03■□□□□ 0.16
AIF1P55008 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
AIF1P55008 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
AIF1P55008 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AIF1P55008 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
AIF1P55008 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
AIF1P55008 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.03■□□□□ 0.16
AIF1P55008 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.03■□□□□ 0.16
AIF1P55008 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AIF1P55008 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
AIF1P55008 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
AIF1P55008 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
AIF1P55008 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.03■□□□□ 0.16
AIF1P55008 AC012508.2-201ENST00000567613 1472 ntBASIC16.03■□□□□ 0.16
AIF1P55008 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AIF1P55008 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
AIF1P55008 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.02■□□□□ 0.16
AIF1P55008 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.02■□□□□ 0.16
AIF1P55008 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AIF1P55008 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AIF1P55008 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AIF1P55008 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.02■□□□□ 0.16
AIF1P55008 FER1L4-210ENST00000615531 5998 ntBASIC16.02■□□□□ 0.16
AIF1P55008 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
AIF1P55008 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
AIF1P55008 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
AIF1P55008 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AIF1P55008 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AIF1P55008 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AIF1P55008 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.02■□□□□ 0.16
AIF1P55008 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.02■□□□□ 0.16
AIF1P55008 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.02■□□□□ 0.16
AIF1P55008 AC002472.2-201ENST00000442739 958 ntBASIC16.02■□□□□ 0.16
AIF1P55008 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AIF1P55008 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
AIF1P55008 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.02■□□□□ 0.16
AIF1P55008 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.02■□□□□ 0.16
AIF1P55008 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.02■□□□□ 0.16
AIF1P55008 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.02■□□□□ 0.16
AIF1P55008 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.02■□□□□ 0.16
AIF1P55008 AL132655.2-201ENST00000596276 594 ntBASIC16.02■□□□□ 0.16
AIF1P55008 AC093813.1-201ENST00000605066 256 ntBASIC16.02■□□□□ 0.16
AIF1P55008 AL662799.1-202ENST00000614205 422 ntBASIC16.02■□□□□ 0.16
AIF1P55008 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
AIF1P55008 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
AIF1P55008 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
AIF1P55008 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.02■□□□□ 0.15
AIF1P55008 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
AIF1P55008 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms