Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EFNA3P52797 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
EFNA3P52797 AC112492.5-201ENST00000421897 457 ntBASIC14.58□□□□□ -0.08
EFNA3P52797 AC134915.1-201ENST00000426461 574 ntBASIC14.58□□□□□ -0.08
EFNA3P52797 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.58□□□□□ -0.08
EFNA3P52797 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.58□□□□□ -0.08
EFNA3P52797 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EFNA3P52797 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.58□□□□□ -0.08
EFNA3P52797 AC011495.1-201ENST00000498085 584 ntBASIC14.58□□□□□ -0.08
EFNA3P52797 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.58□□□□□ -0.08
EFNA3P52797 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.58□□□□□ -0.08
EFNA3P52797 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
EFNA3P52797 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.58□□□□□ -0.08
EFNA3P52797 MIR5189-201ENST00000577370 114 ntBASIC14.58□□□□□ -0.08
EFNA3P52797 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
EFNA3P52797 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.58□□□□□ -0.08
EFNA3P52797 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.58□□□□□ -0.08
EFNA3P52797 AC107373.2-201ENST00000607735 490 ntBASIC14.58□□□□□ -0.08
EFNA3P52797 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.58□□□□□ -0.08
EFNA3P52797 CU634019.7-201ENST00000624153 1185 ntBASIC14.58□□□□□ -0.08
EFNA3P52797 AC005252.2-201ENST00000624630 1141 ntBASIC14.58□□□□□ -0.08
EFNA3P52797 FP236241.2-201ENST00000624906 1185 ntBASIC14.58□□□□□ -0.08
EFNA3P52797 PAUPAR-201ENST00000630360 2965 ntBASIC14.58□□□□□ -0.08
EFNA3P52797 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.58□□□□□ -0.08
EFNA3P52797 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.58□□□□□ -0.08
EFNA3P52797 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
EFNA3P52797 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EFNA3P52797 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
EFNA3P52797 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EFNA3P52797 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.58□□□□□ -0.08
EFNA3P52797 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EFNA3P52797 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.58□□□□□ -0.08
EFNA3P52797 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
EFNA3P52797 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.58□□□□□ -0.08
EFNA3P52797 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.58□□□□□ -0.08
EFNA3P52797 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
EFNA3P52797 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.58□□□□□ -0.08
EFNA3P52797 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EFNA3P52797 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
EFNA3P52797 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
EFNA3P52797 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
EFNA3P52797 KRT8P22-201ENST00000562317 1415 ntBASIC14.58□□□□□ -0.08
EFNA3P52797 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.58□□□□□ -0.08
EFNA3P52797 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EFNA3P52797 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.57□□□□□ -0.08
EFNA3P52797 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EFNA3P52797 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EFNA3P52797 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
EFNA3P52797 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EFNA3P52797 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
EFNA3P52797 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
EFNA3P52797 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
EFNA3P52797 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
EFNA3P52797 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EFNA3P52797 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
EFNA3P52797 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EFNA3P52797 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
EFNA3P52797 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EFNA3P52797 GK-202ENST00000378941 458 ntTSL 3 BASIC14.57□□□□□ -0.08
EFNA3P52797 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.57□□□□□ -0.08
EFNA3P52797 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EFNA3P52797 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
EFNA3P52797 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
EFNA3P52797 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.57□□□□□ -0.08
EFNA3P52797 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.57□□□□□ -0.08
EFNA3P52797 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.57□□□□□ -0.08
EFNA3P52797 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.57□□□□□ -0.08
EFNA3P52797 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.57□□□□□ -0.08
EFNA3P52797 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.57□□□□□ -0.08
EFNA3P52797 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
EFNA3P52797 AC133539.2-201ENST00000604757 467 ntBASIC14.57□□□□□ -0.08
EFNA3P52797 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.57□□□□□ -0.08
EFNA3P52797 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EFNA3P52797 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
EFNA3P52797 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.57□□□□□ -0.08
EFNA3P52797 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.57□□□□□ -0.08
EFNA3P52797 AC132872.4-202ENST00000622924 2756 ntBASIC14.57□□□□□ -0.08
EFNA3P52797 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.57□□□□□ -0.08
EFNA3P52797 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EFNA3P52797 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EFNA3P52797 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EFNA3P52797 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
EFNA3P52797 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.57□□□□□ -0.08
EFNA3P52797 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EFNA3P52797 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
EFNA3P52797 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EFNA3P52797 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EFNA3P52797 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EFNA3P52797 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
EFNA3P52797 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
EFNA3P52797 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.57□□□□□ -0.08
EFNA3P52797 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
EFNA3P52797 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.57□□□□□ -0.08
EFNA3P52797 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.56□□□□□ -0.08
EFNA3P52797 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EFNA3P52797 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EFNA3P52797 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
EFNA3P52797 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.56□□□□□ -0.08
EFNA3P52797 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
EFNA3P52797 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms