Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SLC6A12P48065 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A12P48065 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC6A12P48065 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A12P48065 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC6A12P48065 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SLC6A12P48065 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A12P48065 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A12P48065 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A12P48065 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A12P48065 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.03■□□□□ -0
SLC6A12P48065 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC6A12P48065 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.03■□□□□ -0
SLC6A12P48065 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.03■□□□□ -0
SLC6A12P48065 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.03■□□□□ -0
SLC6A12P48065 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.03■□□□□ -0
SLC6A12P48065 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.03■□□□□ -0
SLC6A12P48065 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.03■□□□□ -0
SLC6A12P48065 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.03■□□□□ -0
SLC6A12P48065 AC011467.4-201ENST00000594891 528 ntBASIC15.03■□□□□ -0
SLC6A12P48065 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A12P48065 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC6A12P48065 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A12P48065 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.03■□□□□ -0
SLC6A12P48065 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC6A12P48065 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A12P48065 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A12P48065 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SLC6A12P48065 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC6A12P48065 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SLC6A12P48065 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A12P48065 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A12P48065 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A12P48065 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC6A12P48065 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.03■□□□□ -0
SLC6A12P48065 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC6A12P48065 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.02■□□□□ -0
SLC6A12P48065 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC6A12P48065 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SLC6A12P48065 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.02■□□□□ -0
SLC6A12P48065 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC6A12P48065 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SLC6A12P48065 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SLC6A12P48065 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SLC6A12P48065 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.02■□□□□ -0
SLC6A12P48065 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.02■□□□□ -0
SLC6A12P48065 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SLC6A12P48065 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SLC6A12P48065 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SLC6A12P48065 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SLC6A12P48065 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC6A12P48065 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC6A12P48065 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SLC6A12P48065 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SLC6A12P48065 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.02■□□□□ -0
SLC6A12P48065 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.02■□□□□ -0
SLC6A12P48065 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC6A12P48065 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC6A12P48065 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.02■□□□□ -0
SLC6A12P48065 BASP1P1-201ENST00000430708 665 ntBASIC15.02■□□□□ -0
SLC6A12P48065 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.02■□□□□ -0
SLC6A12P48065 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SLC6A12P48065 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.02■□□□□ -0
SLC6A12P48065 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.02■□□□□ -0
SLC6A12P48065 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.02■□□□□ -0
SLC6A12P48065 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.02■□□□□ -0
SLC6A12P48065 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
SLC6A12P48065 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC6A12P48065 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC6A12P48065 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SLC6A12P48065 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC6A12P48065 LINC00528-201ENST00000600723 2160 ntBASIC15.02□□□□□ -0.01
SLC6A12P48065 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
SLC6A12P48065 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC6A12P48065 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SLC6A12P48065 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
SLC6A12P48065 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC6A12P48065 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SLC6A12P48065 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC6A12P48065 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SLC6A12P48065 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.02□□□□□ -0.01
SLC6A12P48065 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
SLC6A12P48065 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC6A12P48065 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.02□□□□□ -0.01
SLC6A12P48065 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC6A12P48065 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SLC6A12P48065 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SLC6A12P48065 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A12P48065 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A12P48065 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A12P48065 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A12P48065 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A12P48065 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC6A12P48065 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A12P48065 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A12P48065 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.01□□□□□ -0.01
SLC6A12P48065 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC6A12P48065 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.01□□□□□ -0.01
SLC6A12P48065 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.01□□□□□ -0.01
SLC6A12P48065 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms