Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.3■□□□□ 0.52
NEDD4P46934 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
NEDD4P46934 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.3■□□□□ 0.52
NEDD4P46934 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.3■□□□□ 0.52
NEDD4P46934 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NEDD4P46934 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NEDD4P46934 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NEDD4P46934 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NEDD4P46934 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
NEDD4P46934 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEDD4P46934 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.3■□□□□ 0.52
NEDD4P46934 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.3■□□□□ 0.52
NEDD4P46934 AC138035.3-201ENST00000622706 2791 ntBASIC18.3■□□□□ 0.52
NEDD4P46934 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NEDD4P46934 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEDD4P46934 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEDD4P46934 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.29■□□□□ 0.52
NEDD4P46934 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NEDD4P46934 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEDD4P46934 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
NEDD4P46934 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.29■□□□□ 0.52
NEDD4P46934 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.29■□□□□ 0.52
NEDD4P46934 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEDD4P46934 AC134915.1-201ENST00000426461 574 ntBASIC18.29■□□□□ 0.52
NEDD4P46934 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.29■□□□□ 0.52
NEDD4P46934 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NEDD4P46934 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.29■□□□□ 0.52
NEDD4P46934 AC012645.4-201ENST00000610691 1061 ntBASIC18.29■□□□□ 0.52
NEDD4P46934 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NEDD4P46934 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.29■□□□□ 0.52
NEDD4P46934 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.29■□□□□ 0.52
NEDD4P46934 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEDD4P46934 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
NEDD4P46934 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.29■□□□□ 0.52
NEDD4P46934 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEDD4P46934 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NEDD4P46934 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEDD4P46934 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEDD4P46934 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEDD4P46934 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NEDD4P46934 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.29■□□□□ 0.52
NEDD4P46934 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEDD4P46934 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEDD4P46934 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEDD4P46934 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEDD4P46934 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEDD4P46934 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEDD4P46934 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NEDD4P46934 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.29■□□□□ 0.52
NEDD4P46934 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.29■□□□□ 0.52
NEDD4P46934 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
NEDD4P46934 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NEDD4P46934 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEDD4P46934 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEDD4P46934 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.28■□□□□ 0.52
NEDD4P46934 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NEDD4P46934 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEDD4P46934 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEDD4P46934 C1QBPP1-201ENST00000400117 770 ntBASIC18.28■□□□□ 0.52
NEDD4P46934 AP006294.1-201ENST00000415407 339 ntBASIC18.28■□□□□ 0.52
NEDD4P46934 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.28■□□□□ 0.52
NEDD4P46934 AC005225.4-201ENST00000557330 545 ntBASIC18.28■□□□□ 0.52
NEDD4P46934 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.28■□□□□ 0.52
NEDD4P46934 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NEDD4P46934 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.28■□□□□ 0.52
NEDD4P46934 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.28■□□□□ 0.52
NEDD4P46934 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NEDD4P46934 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.28■□□□□ 0.52
NEDD4P46934 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEDD4P46934 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.28■□□□□ 0.52
NEDD4P46934 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEDD4P46934 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEDD4P46934 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NEDD4P46934 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NEDD4P46934 TNRC18P2-201ENST00000417666 2714 ntBASIC18.28■□□□□ 0.52
NEDD4P46934 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NEDD4P46934 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.28■□□□□ 0.52
NEDD4P46934 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEDD4P46934 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEDD4P46934 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEDD4P46934 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NEDD4P46934 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEDD4P46934 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.28■□□□□ 0.52
NEDD4P46934 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEDD4P46934 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NEDD4P46934 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.27■□□□□ 0.52
NEDD4P46934 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
NEDD4P46934 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18.27■□□□□ 0.52
NEDD4P46934 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NEDD4P46934 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.27■□□□□ 0.52
NEDD4P46934 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NEDD4P46934 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.27■□□□□ 0.52
NEDD4P46934 RPL5P21-201ENST00000404620 815 ntBASIC18.27■□□□□ 0.52
NEDD4P46934 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.27■□□□□ 0.52
NEDD4P46934 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.27■□□□□ 0.52
NEDD4P46934 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.27■□□□□ 0.52
NEDD4P46934 INE1-201ENST00000456273 945 ntBASIC18.27■□□□□ 0.52
NEDD4P46934 RPL13AP25-201ENST00000484130 612 ntBASIC18.27■□□□□ 0.52
NEDD4P46934 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
NEDD4P46934 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms