Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.93□□□□□ -0.34
SNCAP37840 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.93□□□□□ -0.34
SNCAP37840 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.93□□□□□ -0.34
SNCAP37840 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
SNCAP37840 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
SNCAP37840 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.93□□□□□ -0.34
SNCAP37840 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
SNCAP37840 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.93□□□□□ -0.34
SNCAP37840 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
SNCAP37840 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.93□□□□□ -0.34
SNCAP37840 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.93□□□□□ -0.34
SNCAP37840 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 VN2R19P-201ENST00000442399 1052 ntBASIC12.93□□□□□ -0.34
SNCAP37840 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.93□□□□□ -0.34
SNCAP37840 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
SNCAP37840 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.93□□□□□ -0.34
SNCAP37840 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.93□□□□□ -0.34
SNCAP37840 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.93□□□□□ -0.34
SNCAP37840 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
SNCAP37840 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
SNCAP37840 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SNCAP37840 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SNCAP37840 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.92□□□□□ -0.34
SNCAP37840 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SNCAP37840 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SNCAP37840 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC12.92□□□□□ -0.34
SNCAP37840 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SNCAP37840 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.92□□□□□ -0.34
SNCAP37840 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SNCAP37840 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
SNCAP37840 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.92□□□□□ -0.34
SNCAP37840 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SNCAP37840 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SNCAP37840 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SNCAP37840 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SNCAP37840 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.92□□□□□ -0.34
SNCAP37840 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SNCAP37840 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SNCAP37840 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC12.92□□□□□ -0.34
SNCAP37840 UNC93B7-201ENST00000509439 705 ntBASIC12.92□□□□□ -0.34
SNCAP37840 AC008677.1-201ENST00000519230 1561 ntBASIC12.92□□□□□ -0.34
SNCAP37840 CFL1-202ENST00000524553 860 ntTSL 2 BASIC12.92□□□□□ -0.34
SNCAP37840 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.92□□□□□ -0.34
SNCAP37840 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.92□□□□□ -0.34
SNCAP37840 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SNCAP37840 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC12.92□□□□□ -0.34
SNCAP37840 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.92□□□□□ -0.34
SNCAP37840 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.92□□□□□ -0.34
SNCAP37840 AL773604.1-201ENST00000617417 272 ntBASIC12.92□□□□□ -0.34
SNCAP37840 FAM215A-202ENST00000632077 792 ntBASIC12.92□□□□□ -0.34
SNCAP37840 AC007064.4-201ENST00000637740 555 ntBASIC12.92□□□□□ -0.34
SNCAP37840 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SNCAP37840 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SNCAP37840 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SNCAP37840 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SNCAP37840 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SNCAP37840 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SNCAP37840 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SNCAP37840 REXO1L2P-201ENST00000425429 2069 ntBASIC12.92□□□□□ -0.34
SNCAP37840 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SNCAP37840 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SNCAP37840 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNCAP37840 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNCAP37840 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNCAP37840 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
SNCAP37840 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms