Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
SCNN1AP37088 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.16■□□□□ 0.18
SCNN1AP37088 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.16■□□□□ 0.18
SCNN1AP37088 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 AL138799.1-201ENST00000448213 1675 ntBASIC16.16■□□□□ 0.18
SCNN1AP37088 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.16■□□□□ 0.18
SCNN1AP37088 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.16■□□□□ 0.18
SCNN1AP37088 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.16■□□□□ 0.18
SCNN1AP37088 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.16■□□□□ 0.18
SCNN1AP37088 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.16■□□□□ 0.18
SCNN1AP37088 AC134915.1-201ENST00000426461 574 ntBASIC16.16■□□□□ 0.18
SCNN1AP37088 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.16■□□□□ 0.18
SCNN1AP37088 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.16■□□□□ 0.18
SCNN1AP37088 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.16■□□□□ 0.18
SCNN1AP37088 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.16■□□□□ 0.18
SCNN1AP37088 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 AC140912.1-201ENST00000577171 1054 ntBASIC16.16■□□□□ 0.18
SCNN1AP37088 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.16■□□□□ 0.18
SCNN1AP37088 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SCNN1AP37088 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.16■□□□□ 0.18
SCNN1AP37088 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.16■□□□□ 0.18
SCNN1AP37088 CHCHD2P3-201ENST00000603038 451 ntBASIC16.16■□□□□ 0.18
SCNN1AP37088 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.16■□□□□ 0.18
SCNN1AP37088 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.16■□□□□ 0.18
SCNN1AP37088 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SCNN1AP37088 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
SCNN1AP37088 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.16■□□□□ 0.18
SCNN1AP37088 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.16■□□□□ 0.18
SCNN1AP37088 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.16■□□□□ 0.18
SCNN1AP37088 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SCNN1AP37088 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
SCNN1AP37088 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SCNN1AP37088 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SCNN1AP37088 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCNN1AP37088 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCNN1AP37088 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCNN1AP37088 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.15■□□□□ 0.18
SCNN1AP37088 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.15■□□□□ 0.18
SCNN1AP37088 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCNN1AP37088 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCNN1AP37088 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCNN1AP37088 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCNN1AP37088 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCNN1AP37088 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCNN1AP37088 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
SCNN1AP37088 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCNN1AP37088 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.15■□□□□ 0.18
SCNN1AP37088 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.15■□□□□ 0.18
SCNN1AP37088 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.15■□□□□ 0.18
SCNN1AP37088 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.15■□□□□ 0.18
SCNN1AP37088 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.15■□□□□ 0.18
SCNN1AP37088 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCNN1AP37088 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.15■□□□□ 0.18
SCNN1AP37088 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.15■□□□□ 0.18
SCNN1AP37088 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.15■□□□□ 0.18
SCNN1AP37088 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.15■□□□□ 0.18
SCNN1AP37088 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCNN1AP37088 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SCNN1AP37088 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.15■□□□□ 0.18
SCNN1AP37088 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.15■□□□□ 0.18
SCNN1AP37088 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.15■□□□□ 0.18
SCNN1AP37088 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.15■□□□□ 0.18
SCNN1AP37088 AC124283.3-201ENST00000570869 594 ntBASIC16.15■□□□□ 0.18
SCNN1AP37088 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.15■□□□□ 0.18
SCNN1AP37088 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.15■□□□□ 0.18
SCNN1AP37088 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.15■□□□□ 0.18
SCNN1AP37088 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.15■□□□□ 0.18
SCNN1AP37088 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SCNN1AP37088 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SCNN1AP37088 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCNN1AP37088 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCNN1AP37088 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SCNN1AP37088 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SCNN1AP37088 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms