Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
KRT9P35527 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT9P35527 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT9P35527 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.14■□□□□ 0.33
KRT9P35527 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KRT9P35527 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT9P35527 ALG1L8P-201ENST00000533887 760 ntBASIC17.14■□□□□ 0.33
KRT9P35527 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.14■□□□□ 0.33
KRT9P35527 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.14■□□□□ 0.33
KRT9P35527 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.14■□□□□ 0.33
KRT9P35527 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.14■□□□□ 0.33
KRT9P35527 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT9P35527 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.14■□□□□ 0.33
KRT9P35527 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.14■□□□□ 0.33
KRT9P35527 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT9P35527 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
KRT9P35527 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT9P35527 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT9P35527 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
KRT9P35527 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.14■□□□□ 0.33
KRT9P35527 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KRT9P35527 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KRT9P35527 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
KRT9P35527 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KRT9P35527 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
KRT9P35527 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
KRT9P35527 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
KRT9P35527 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
KRT9P35527 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
KRT9P35527 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
KRT9P35527 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
KRT9P35527 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT9P35527 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
KRT9P35527 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT9P35527 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT9P35527 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
KRT9P35527 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT9P35527 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.13■□□□□ 0.33
KRT9P35527 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT9P35527 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT9P35527 AL390755.1-201ENST00000623716 2027 ntBASIC17.13■□□□□ 0.33
KRT9P35527 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT9P35527 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT9P35527 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
KRT9P35527 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT9P35527 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
KRT9P35527 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT9P35527 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
KRT9P35527 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.13■□□□□ 0.33
KRT9P35527 FAM58DP-201ENST00000428076 619 ntBASIC17.13■□□□□ 0.33
KRT9P35527 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.13■□□□□ 0.33
KRT9P35527 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT9P35527 EEF1DP4-201ENST00000446006 880 ntBASIC17.13■□□□□ 0.33
KRT9P35527 AL139010.1-201ENST00000454878 894 ntBASIC17.13■□□□□ 0.33
KRT9P35527 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT9P35527 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.13■□□□□ 0.33
KRT9P35527 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT9P35527 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
KRT9P35527 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.13■□□□□ 0.33
KRT9P35527 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.13■□□□□ 0.33
KRT9P35527 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.13■□□□□ 0.33
KRT9P35527 AC026979.3-201ENST00000607315 403 ntBASIC17.13■□□□□ 0.33
KRT9P35527 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.13■□□□□ 0.33
KRT9P35527 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.13■□□□□ 0.33
KRT9P35527 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT9P35527 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT9P35527 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT9P35527 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
KRT9P35527 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT9P35527 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT9P35527 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
KRT9P35527 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT9P35527 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
KRT9P35527 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT9P35527 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT9P35527 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KRT9P35527 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
KRT9P35527 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KRT9P35527 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.13■□□□□ 0.33
KRT9P35527 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
KRT9P35527 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT9P35527 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT9P35527 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
KRT9P35527 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT9P35527 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
KRT9P35527 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.12■□□□□ 0.33
KRT9P35527 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT9P35527 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT9P35527 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
KRT9P35527 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT9P35527 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KRT9P35527 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT9P35527 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT9P35527 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
KRT9P35527 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT9P35527 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.12■□□□□ 0.33
KRT9P35527 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KRT9P35527 KRT18P13-201ENST00000400056 1290 ntBASIC17.12■□□□□ 0.33
KRT9P35527 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.12■□□□□ 0.33
KRT9P35527 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms