Protein–RNA interactions for Protein: P35240

NF2, Merlin, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF2P35240 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NF2P35240 AL138799.1-201ENST00000448213 1675 ntBASIC18.41■□□□□ 0.54
NF2P35240 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.41■□□□□ 0.54
NF2P35240 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NF2P35240 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NF2P35240 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NF2P35240 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NF2P35240 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NF2P35240 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NF2P35240 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NF2P35240 TPM3P8-201ENST00000330554 643 ntBASIC18.41■□□□□ 0.54
NF2P35240 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
NF2P35240 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC18.41■□□□□ 0.54
NF2P35240 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC18.41■□□□□ 0.54
NF2P35240 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC18.41■□□□□ 0.54
NF2P35240 EIF4HP1-201ENST00000453115 687 ntBASIC18.41■□□□□ 0.54
NF2P35240 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC18.41■□□□□ 0.54
NF2P35240 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC18.41■□□□□ 0.54
NF2P35240 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
NF2P35240 AC105129.2-201ENST00000559536 390 ntBASIC18.41■□□□□ 0.54
NF2P35240 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC18.41■□□□□ 0.54
NF2P35240 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC18.41■□□□□ 0.54
NF2P35240 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC18.41■□□□□ 0.54
NF2P35240 NDUFV2P1-201ENST00000596415 907 ntBASIC18.41■□□□□ 0.54
NF2P35240 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.41■□□□□ 0.54
NF2P35240 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NF2P35240 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NF2P35240 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.41■□□□□ 0.54
NF2P35240 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
NF2P35240 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.41■□□□□ 0.54
NF2P35240 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NF2P35240 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
NF2P35240 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NF2P35240 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
NF2P35240 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.41■□□□□ 0.54
NF2P35240 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NF2P35240 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.41■□□□□ 0.54
NF2P35240 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.41■□□□□ 0.54
NF2P35240 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NF2P35240 FLJ16779-201ENST00000612722 7638 ntBASIC18.41■□□□□ 0.54
NF2P35240 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NF2P35240 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NF2P35240 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NF2P35240 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC18.4■□□□□ 0.54
NF2P35240 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.4■□□□□ 0.54
NF2P35240 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NF2P35240 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NF2P35240 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NF2P35240 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.4■□□□□ 0.54
NF2P35240 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NF2P35240 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NF2P35240 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NF2P35240 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NF2P35240 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NF2P35240 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.4■□□□□ 0.54
NF2P35240 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.4■□□□□ 0.54
NF2P35240 HINT2P1-201ENST00000419438 481 ntBASIC18.4■□□□□ 0.54
NF2P35240 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC18.4■□□□□ 0.54
NF2P35240 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC18.4■□□□□ 0.54
NF2P35240 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC18.4■□□□□ 0.54
NF2P35240 NKG7-204ENST00000595217 816 ntTSL 2 BASIC18.4■□□□□ 0.54
NF2P35240 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.4■□□□□ 0.54
NF2P35240 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
NF2P35240 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
NF2P35240 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
NF2P35240 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NF2P35240 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NF2P35240 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NF2P35240 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NF2P35240 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
NF2P35240 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NF2P35240 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.4■□□□□ 0.54
NF2P35240 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
NF2P35240 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NF2P35240 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NF2P35240 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NF2P35240 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
NF2P35240 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NF2P35240 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
NF2P35240 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NF2P35240 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.4■□□□□ 0.54
NF2P35240 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NF2P35240 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.4■□□□□ 0.54
NF2P35240 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.4■□□□□ 0.54
NF2P35240 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NF2P35240 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NF2P35240 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NF2P35240 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NF2P35240 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NF2P35240 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NF2P35240 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
NF2P35240 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.39■□□□□ 0.53
NF2P35240 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NF2P35240 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.39■□□□□ 0.53
NF2P35240 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NF2P35240 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NF2P35240 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NF2P35240 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NF2P35240 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC18.39■□□□□ 0.53
NF2P35240 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms