Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA3P32297 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CHRNA3P32297 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA3P32297 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
CHRNA3P32297 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA3P32297 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA3P32297 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA3P32297 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA3P32297 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.51■□□□□ 0.23
CHRNA3P32297 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CHRNA3P32297 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.51■□□□□ 0.23
CHRNA3P32297 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.51■□□□□ 0.23
CHRNA3P32297 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA3P32297 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CHRNA3P32297 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA3P32297 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA3P32297 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
CHRNA3P32297 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.51■□□□□ 0.23
CHRNA3P32297 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA3P32297 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CHRNA3P32297 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA3P32297 AC004987.2-201ENST00000395959 1148 ntBASIC16.51■□□□□ 0.23
CHRNA3P32297 BASP1P1-201ENST00000430708 665 ntBASIC16.51■□□□□ 0.23
CHRNA3P32297 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.51■□□□□ 0.23
CHRNA3P32297 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.51■□□□□ 0.23
CHRNA3P32297 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.51■□□□□ 0.23
CHRNA3P32297 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.51■□□□□ 0.23
CHRNA3P32297 AC097493.3-201ENST00000509725 367 ntBASIC16.51■□□□□ 0.23
CHRNA3P32297 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.51■□□□□ 0.23
CHRNA3P32297 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.51■□□□□ 0.23
CHRNA3P32297 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.51■□□□□ 0.23
CHRNA3P32297 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
CHRNA3P32297 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.51■□□□□ 0.23
CHRNA3P32297 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA3P32297 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA3P32297 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.51■□□□□ 0.23
CHRNA3P32297 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA3P32297 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHRNA3P32297 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.51■□□□□ 0.23
CHRNA3P32297 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CHRNA3P32297 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CHRNA3P32297 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA3P32297 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA3P32297 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA3P32297 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA3P32297 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA3P32297 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA3P32297 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.5■□□□□ 0.23
CHRNA3P32297 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA3P32297 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA3P32297 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA3P32297 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA3P32297 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CHRNA3P32297 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.5■□□□□ 0.23
CHRNA3P32297 FAM8A3P-201ENST00000427218 844 ntBASIC16.5■□□□□ 0.23
CHRNA3P32297 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.5■□□□□ 0.23
CHRNA3P32297 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CHRNA3P32297 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.5■□□□□ 0.23
CHRNA3P32297 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.5■□□□□ 0.23
CHRNA3P32297 AC092364.2-202ENST00000597012 1073 ntBASIC16.5■□□□□ 0.23
CHRNA3P32297 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA3P32297 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CHRNA3P32297 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.5■□□□□ 0.23
CHRNA3P32297 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA3P32297 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CHRNA3P32297 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA3P32297 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA3P32297 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA3P32297 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.5■□□□□ 0.23
CHRNA3P32297 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA3P32297 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.5■□□□□ 0.23
CHRNA3P32297 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA3P32297 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA3P32297 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.5■□□□□ 0.23
CHRNA3P32297 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRNA3P32297 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.5■□□□□ 0.23
CHRNA3P32297 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CHRNA3P32297 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.49■□□□□ 0.23
CHRNA3P32297 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.49■□□□□ 0.23
CHRNA3P32297 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA3P32297 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA3P32297 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA3P32297 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA3P32297 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA3P32297 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.49■□□□□ 0.23
CHRNA3P32297 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
CHRNA3P32297 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA3P32297 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA3P32297 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA3P32297 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA3P32297 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA3P32297 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.49■□□□□ 0.23
CHRNA3P32297 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA3P32297 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA3P32297 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHRNA3P32297 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.49■□□□□ 0.23
CHRNA3P32297 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.49■□□□□ 0.23
CHRNA3P32297 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.49■□□□□ 0.23
CHRNA3P32297 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CHRNA3P32297 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms