Protein–RNA interactions for Protein: P32247

BRS3, Bombesin receptor subtype-3, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRS3P32247 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BRS3P32247 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BRS3P32247 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BRS3P32247 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BRS3P32247 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
BRS3P32247 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BRS3P32247 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
BRS3P32247 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC12.92□□□□□ -0.34
BRS3P32247 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.92□□□□□ -0.34
BRS3P32247 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.92□□□□□ -0.34
BRS3P32247 SPDYE17-201ENST00000412399 783 ntBASIC12.92□□□□□ -0.34
BRS3P32247 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC12.92□□□□□ -0.34
BRS3P32247 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.92□□□□□ -0.34
BRS3P32247 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.92□□□□□ -0.34
BRS3P32247 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.92□□□□□ -0.34
BRS3P32247 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BRS3P32247 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.92□□□□□ -0.34
BRS3P32247 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.92□□□□□ -0.34
BRS3P32247 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BRS3P32247 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
BRS3P32247 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.92□□□□□ -0.34
BRS3P32247 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.92□□□□□ -0.34
BRS3P32247 AL133215.2-201ENST00000609242 977 ntBASIC12.92□□□□□ -0.34
BRS3P32247 AL138828.2-201ENST00000615812 383 ntBASIC12.92□□□□□ -0.34
BRS3P32247 AL390754.1-201ENST00000619088 582 ntBASIC12.92□□□□□ -0.34
BRS3P32247 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BRS3P32247 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
BRS3P32247 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BRS3P32247 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
BRS3P32247 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
BRS3P32247 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BRS3P32247 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.92□□□□□ -0.34
BRS3P32247 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
BRS3P32247 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.92□□□□□ -0.34
BRS3P32247 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
BRS3P32247 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
BRS3P32247 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
BRS3P32247 AP002414.2-201ENST00000591780 3365 ntBASIC12.92□□□□□ -0.34
BRS3P32247 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
BRS3P32247 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
BRS3P32247 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BRS3P32247 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
BRS3P32247 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
BRS3P32247 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.91□□□□□ -0.34
BRS3P32247 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BRS3P32247 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BRS3P32247 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BRS3P32247 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
BRS3P32247 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.91□□□□□ -0.34
BRS3P32247 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
BRS3P32247 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BRS3P32247 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.91□□□□□ -0.34
BRS3P32247 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
BRS3P32247 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
BRS3P32247 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BRS3P32247 KRT8P37-201ENST00000451609 1420 ntBASIC12.91□□□□□ -0.34
BRS3P32247 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
BRS3P32247 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BRS3P32247 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BRS3P32247 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BRS3P32247 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.91□□□□□ -0.34
BRS3P32247 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
BRS3P32247 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
BRS3P32247 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
BRS3P32247 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BRS3P32247 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
BRS3P32247 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
BRS3P32247 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
BRS3P32247 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.91□□□□□ -0.34
BRS3P32247 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.91□□□□□ -0.34
BRS3P32247 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.91□□□□□ -0.34
BRS3P32247 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
BRS3P32247 RN7SL618P-201ENST00000477850 296 ntBASIC12.91□□□□□ -0.34
BRS3P32247 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
BRS3P32247 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12.91□□□□□ -0.34
BRS3P32247 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.91□□□□□ -0.34
BRS3P32247 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.91□□□□□ -0.34
BRS3P32247 BANF1P1-201ENST00000553684 263 ntBASIC12.91□□□□□ -0.34
BRS3P32247 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
BRS3P32247 SPDYE12P-201ENST00000618416 771 ntBASIC12.91□□□□□ -0.34
BRS3P32247 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
BRS3P32247 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
BRS3P32247 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
BRS3P32247 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BRS3P32247 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC12.91□□□□□ -0.34
BRS3P32247 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.91□□□□□ -0.34
BRS3P32247 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.91□□□□□ -0.34
BRS3P32247 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.91□□□□□ -0.34
BRS3P32247 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.91□□□□□ -0.34
BRS3P32247 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
BRS3P32247 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BRS3P32247 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
BRS3P32247 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC12.91□□□□□ -0.34
BRS3P32247 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.91□□□□□ -0.34
BRS3P32247 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.91□□□□□ -0.34
BRS3P32247 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BRS3P32247 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
BRS3P32247 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
BRS3P32247 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
BRS3P32247 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms