Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
SLC6A4P31645 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A4P31645 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SLC6A4P31645 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC6A4P31645 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.95■□□□□ 0.14
SLC6A4P31645 AC015936.2-201ENST00000593177 259 ntBASIC15.95■□□□□ 0.14
SLC6A4P31645 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC6A4P31645 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SLC6A4P31645 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC6A4P31645 AL162274.1-201ENST00000617191 1098 ntBASIC15.95■□□□□ 0.14
SLC6A4P31645 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.95■□□□□ 0.14
SLC6A4P31645 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A4P31645 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A4P31645 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A4P31645 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SLC6A4P31645 AC020658.6-201ENST00000623564 1870 ntBASIC15.95■□□□□ 0.14
SLC6A4P31645 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC6A4P31645 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A4P31645 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC6A4P31645 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A4P31645 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A4P31645 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A4P31645 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
SLC6A4P31645 NFIC-211ENST00000641145 8399 ntBASIC15.94■□□□□ 0.14
SLC6A4P31645 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A4P31645 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.94■□□□□ 0.14
SLC6A4P31645 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.94■□□□□ 0.14
SLC6A4P31645 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A4P31645 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A4P31645 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
SLC6A4P31645 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SLC6A4P31645 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
SLC6A4P31645 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A4P31645 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.94■□□□□ 0.14
SLC6A4P31645 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A4P31645 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.94■□□□□ 0.14
SLC6A4P31645 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.94■□□□□ 0.14
SLC6A4P31645 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
SLC6A4P31645 SLC25A47P1-201ENST00000531577 414 ntBASIC15.94■□□□□ 0.14
SLC6A4P31645 KRT17P8-201ENST00000540749 863 ntBASIC15.94■□□□□ 0.14
SLC6A4P31645 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC6A4P31645 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SLC6A4P31645 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC6A4P31645 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.94■□□□□ 0.14
SLC6A4P31645 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC6A4P31645 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC6A4P31645 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
SLC6A4P31645 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC6A4P31645 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A4P31645 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A4P31645 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A4P31645 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC6A4P31645 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A4P31645 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A4P31645 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A4P31645 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A4P31645 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A4P31645 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.93■□□□□ 0.14
SLC6A4P31645 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
SLC6A4P31645 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A4P31645 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
SLC6A4P31645 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A4P31645 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SLC6A4P31645 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A4P31645 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A4P31645 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.93■□□□□ 0.14
SLC6A4P31645 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.93■□□□□ 0.14
SLC6A4P31645 CROCCP4-201ENST00000457096 498 ntBASIC15.93■□□□□ 0.14
SLC6A4P31645 AC068587.3-201ENST00000526613 355 ntBASIC15.93■□□□□ 0.14
SLC6A4P31645 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.93■□□□□ 0.14
SLC6A4P31645 AP001063.1-201ENST00000568332 529 ntBASIC15.93■□□□□ 0.14
SLC6A4P31645 AC106886.1-201ENST00000568660 600 ntBASIC15.93■□□□□ 0.14
SLC6A4P31645 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
SLC6A4P31645 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.93■□□□□ 0.14
SLC6A4P31645 BTNL10-201ENST00000595971 695 ntBASIC15.93■□□□□ 0.14
SLC6A4P31645 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A4P31645 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.93■□□□□ 0.14
SLC6A4P31645 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.93■□□□□ 0.14
SLC6A4P31645 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
SLC6A4P31645 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.93■□□□□ 0.14
SLC6A4P31645 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.93■□□□□ 0.14
SLC6A4P31645 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
SLC6A4P31645 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.93■□□□□ 0.14
SLC6A4P31645 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A4P31645 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SLC6A4P31645 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SLC6A4P31645 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
SLC6A4P31645 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
SLC6A4P31645 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.92■□□□□ 0.14
SLC6A4P31645 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SLC6A4P31645 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms