Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VAMP1P23763 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VAMP1P23763 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VAMP1P23763 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.29□□□□□ -0.28
VAMP1P23763 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VAMP1P23763 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VAMP1P23763 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.29□□□□□ -0.28
VAMP1P23763 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.28□□□□□ -0.28
VAMP1P23763 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.28□□□□□ -0.28
VAMP1P23763 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.28□□□□□ -0.28
VAMP1P23763 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
VAMP1P23763 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
VAMP1P23763 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.28□□□□□ -0.28
VAMP1P23763 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
VAMP1P23763 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.28□□□□□ -0.28
VAMP1P23763 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.28□□□□□ -0.28
VAMP1P23763 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.28□□□□□ -0.28
VAMP1P23763 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.28□□□□□ -0.28
VAMP1P23763 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.28□□□□□ -0.28
VAMP1P23763 AC093724.1-201ENST00000448659 1027 ntBASIC13.28□□□□□ -0.28
VAMP1P23763 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
VAMP1P23763 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.28□□□□□ -0.28
VAMP1P23763 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.28□□□□□ -0.28
VAMP1P23763 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.28□□□□□ -0.28
VAMP1P23763 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.28□□□□□ -0.28
VAMP1P23763 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
VAMP1P23763 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 AC005332.1-201ENST00000577698 1310 ntBASIC13.28□□□□□ -0.28
VAMP1P23763 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.28□□□□□ -0.28
VAMP1P23763 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.28□□□□□ -0.28
VAMP1P23763 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.28□□□□□ -0.28
VAMP1P23763 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
VAMP1P23763 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.28□□□□□ -0.28
VAMP1P23763 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.28□□□□□ -0.28
VAMP1P23763 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.28□□□□□ -0.28
VAMP1P23763 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.28□□□□□ -0.28
VAMP1P23763 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
VAMP1P23763 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VAMP1P23763 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VAMP1P23763 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
VAMP1P23763 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.27□□□□□ -0.28
VAMP1P23763 AC127383.1-201ENST00000444697 1800 ntBASIC13.27□□□□□ -0.28
VAMP1P23763 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
VAMP1P23763 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VAMP1P23763 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VAMP1P23763 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VAMP1P23763 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
VAMP1P23763 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.27□□□□□ -0.28
VAMP1P23763 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
VAMP1P23763 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
VAMP1P23763 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
VAMP1P23763 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
VAMP1P23763 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
VAMP1P23763 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VAMP1P23763 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VAMP1P23763 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
VAMP1P23763 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.27□□□□□ -0.29
VAMP1P23763 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
VAMP1P23763 AC106795.1-205ENST00000512851 1056 ntBASIC13.27□□□□□ -0.29
VAMP1P23763 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.27□□□□□ -0.29
VAMP1P23763 AP002469.2-201ENST00000531724 424 ntBASIC13.27□□□□□ -0.29
VAMP1P23763 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.27□□□□□ -0.29
VAMP1P23763 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.27□□□□□ -0.29
VAMP1P23763 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.27□□□□□ -0.29
VAMP1P23763 AC012615.1-201ENST00000565797 1299 ntBASIC13.27□□□□□ -0.29
VAMP1P23763 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
VAMP1P23763 AC069148.1-201ENST00000608741 768 ntBASIC13.27□□□□□ -0.29
VAMP1P23763 AC091076.1-201ENST00000610741 619 ntBASIC13.27□□□□□ -0.29
VAMP1P23763 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.27□□□□□ -0.29
VAMP1P23763 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms