Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BCKDHBP21953 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BCKDHBP21953 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.3■□□□□ 0.04
BCKDHBP21953 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BCKDHBP21953 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.3■□□□□ 0.04
BCKDHBP21953 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BCKDHBP21953 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BCKDHBP21953 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.3■□□□□ 0.04
BCKDHBP21953 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.3■□□□□ 0.04
BCKDHBP21953 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.3■□□□□ 0.04
BCKDHBP21953 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.3■□□□□ 0.04
BCKDHBP21953 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.3■□□□□ 0.04
BCKDHBP21953 KRT8P19-201ENST00000551916 1455 ntBASIC15.3■□□□□ 0.04
BCKDHBP21953 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
BCKDHBP21953 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.3■□□□□ 0.04
BCKDHBP21953 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC15.3■□□□□ 0.04
BCKDHBP21953 AC007663.3-201ENST00000609632 465 ntBASIC15.3■□□□□ 0.04
BCKDHBP21953 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BCKDHBP21953 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BCKDHBP21953 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BCKDHBP21953 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
BCKDHBP21953 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BCKDHBP21953 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.3■□□□□ 0.04
BCKDHBP21953 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.3■□□□□ 0.04
BCKDHBP21953 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
BCKDHBP21953 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHBP21953 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHBP21953 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.29■□□□□ 0.04
BCKDHBP21953 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHBP21953 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.29■□□□□ 0.04
BCKDHBP21953 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHBP21953 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHBP21953 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHBP21953 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
BCKDHBP21953 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHBP21953 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHBP21953 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHBP21953 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
BCKDHBP21953 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHBP21953 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
BCKDHBP21953 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
BCKDHBP21953 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.29■□□□□ 0.04
BCKDHBP21953 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.29■□□□□ 0.04
BCKDHBP21953 FAM8A4P-201ENST00000435433 1213 ntBASIC15.29■□□□□ 0.04
BCKDHBP21953 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.29■□□□□ 0.04
BCKDHBP21953 RN7SL769P-201ENST00000469386 295 ntBASIC15.29■□□□□ 0.04
BCKDHBP21953 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.29■□□□□ 0.04
BCKDHBP21953 COX5BP1-201ENST00000507622 393 ntBASIC15.29■□□□□ 0.04
BCKDHBP21953 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.29■□□□□ 0.04
BCKDHBP21953 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.29■□□□□ 0.04
BCKDHBP21953 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.29■□□□□ 0.04
BCKDHBP21953 PPY2P-201ENST00000582808 702 ntBASIC15.29■□□□□ 0.04
BCKDHBP21953 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHBP21953 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
BCKDHBP21953 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.29■□□□□ 0.04
BCKDHBP21953 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.29■□□□□ 0.04
BCKDHBP21953 AC244157.2-201ENST00000616239 1006 ntBASIC15.29■□□□□ 0.04
BCKDHBP21953 PRSS30P-206ENST00000641773 873 ntBASIC15.29■□□□□ 0.04
BCKDHBP21953 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHBP21953 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.29■□□□□ 0.04
BCKDHBP21953 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
BCKDHBP21953 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.29■□□□□ 0.04
BCKDHBP21953 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHBP21953 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHBP21953 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHBP21953 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHBP21953 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHBP21953 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHBP21953 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHBP21953 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHBP21953 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHBP21953 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BCKDHBP21953 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.29■□□□□ 0.04
BCKDHBP21953 AC022188.1-201ENST00000620960 1664 ntBASIC15.28■□□□□ 0.04
BCKDHBP21953 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHBP21953 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.28■□□□□ 0.04
BCKDHBP21953 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHBP21953 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHBP21953 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHBP21953 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHBP21953 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHBP21953 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHBP21953 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHBP21953 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
BCKDHBP21953 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHBP21953 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHBP21953 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
BCKDHBP21953 NKILA-202ENST00000614771 2598 ntBASIC15.28■□□□□ 0.04
BCKDHBP21953 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
BCKDHBP21953 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
BCKDHBP21953 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BCKDHBP21953 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.28■□□□□ 0.04
BCKDHBP21953 SPTLC1P5-201ENST00000450718 252 ntBASIC15.28■□□□□ 0.04
BCKDHBP21953 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.28■□□□□ 0.04
BCKDHBP21953 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.28■□□□□ 0.04
BCKDHBP21953 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.28■□□□□ 0.04
BCKDHBP21953 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.28■□□□□ 0.04
BCKDHBP21953 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.28■□□□□ 0.04
BCKDHBP21953 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.28■□□□□ 0.04
BCKDHBP21953 AC005730.2-201ENST00000564549 1184 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms