Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC12.4□□□□□ -0.42
NF1P21359 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
NF1P21359 OR2K2-202ENST00000374428 1038 ntBASIC12.4□□□□□ -0.42
NF1P21359 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.4□□□□□ -0.42
NF1P21359 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.4□□□□□ -0.42
NF1P21359 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC12.4□□□□□ -0.42
NF1P21359 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
NF1P21359 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.4□□□□□ -0.42
NF1P21359 GDNF-207ENST00000515058 764 ntTSL 5 BASIC12.4□□□□□ -0.42
NF1P21359 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC12.4□□□□□ -0.42
NF1P21359 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC12.4□□□□□ -0.42
NF1P21359 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC12.4□□□□□ -0.42
NF1P21359 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.4□□□□□ -0.42
NF1P21359 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NF1P21359 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NF1P21359 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC12.4□□□□□ -0.42
NF1P21359 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
NF1P21359 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NF1P21359 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NF1P21359 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
NF1P21359 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
NF1P21359 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NF1P21359 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC12.4□□□□□ -0.42
NF1P21359 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NF1P21359 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NF1P21359 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NF1P21359 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.4□□□□□ -0.42
NF1P21359 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NF1P21359 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NF1P21359 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NF1P21359 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NF1P21359 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
NF1P21359 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NF1P21359 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NF1P21359 RPL14-203ENST00000416518 812 ntTSL 3 BASIC12.4□□□□□ -0.42
NF1P21359 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.4□□□□□ -0.42
NF1P21359 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NF1P21359 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NF1P21359 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC12.4□□□□□ -0.42
NF1P21359 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NF1P21359 POLD4-208ENST00000532830 904 ntTSL 3 BASIC12.4□□□□□ -0.42
NF1P21359 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.4□□□□□ -0.42
NF1P21359 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
NF1P21359 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
NF1P21359 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NF1P21359 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
NF1P21359 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.4□□□□□ -0.42
NF1P21359 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
NF1P21359 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
NF1P21359 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
NF1P21359 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.4□□□□□ -0.43
NF1P21359 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC12.4□□□□□ -0.43
NF1P21359 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
NF1P21359 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
NF1P21359 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
NF1P21359 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
NF1P21359 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.39□□□□□ -0.43
NF1P21359 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.39□□□□□ -0.43
NF1P21359 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
NF1P21359 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
NF1P21359 BAK1P1-201ENST00000317045 636 ntBASIC12.39□□□□□ -0.43
NF1P21359 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.39□□□□□ -0.43
NF1P21359 AL627422.1-201ENST00000434104 580 ntBASIC12.39□□□□□ -0.43
NF1P21359 CHMP1AP1-201ENST00000445563 662 ntBASIC12.39□□□□□ -0.43
NF1P21359 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC12.39□□□□□ -0.43
NF1P21359 AC093909.3-201ENST00000504783 336 ntBASIC12.39□□□□□ -0.43
NF1P21359 SLED1-202ENST00000512051 380 ntBASIC12.39□□□□□ -0.43
NF1P21359 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC12.39□□□□□ -0.43
NF1P21359 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC12.39□□□□□ -0.43
NF1P21359 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC12.39□□□□□ -0.43
NF1P21359 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC12.39□□□□□ -0.43
NF1P21359 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC12.39□□□□□ -0.43
NF1P21359 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC12.39□□□□□ -0.43
NF1P21359 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC12.39□□□□□ -0.43
NF1P21359 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC12.39□□□□□ -0.43
NF1P21359 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
NF1P21359 AL451007.2-201ENST00000632004 563 ntBASIC12.39□□□□□ -0.43
NF1P21359 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.39□□□□□ -0.43
NF1P21359 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
NF1P21359 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
NF1P21359 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
NF1P21359 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
NF1P21359 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
NF1P21359 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
NF1P21359 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NF1P21359 FAM90A7P-201ENST00000382628 1395 ntBASIC12.39□□□□□ -0.43
NF1P21359 FAM90A23P-201ENST00000400136 1395 ntBASIC12.39□□□□□ -0.43
NF1P21359 FAM90A21P-201ENST00000510875 1396 ntBASIC12.39□□□□□ -0.43
NF1P21359 FAM90A15P-201ENST00000514465 1395 ntBASIC12.39□□□□□ -0.43
NF1P21359 FAM90A6P-201ENST00000515148 1394 ntBASIC12.39□□□□□ -0.43
NF1P21359 FAM90A16P-201ENST00000526662 1395 ntBASIC12.39□□□□□ -0.43
NF1P21359 FAM90A9P-201ENST00000527940 1395 ntBASIC12.39□□□□□ -0.43
NF1P21359 FAM90A5P-201ENST00000528738 1395 ntBASIC12.39□□□□□ -0.43
NF1P21359 FAM90A14P-201ENST00000530386 1395 ntBASIC12.39□□□□□ -0.43
NF1P21359 FAM90A13P-201ENST00000534703 1395 ntBASIC12.39□□□□□ -0.43
NF1P21359 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC12.39□□□□□ -0.43
NF1P21359 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NF1P21359 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
NF1P21359 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
NF1P21359 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms