Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB3BP20337 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB3BP20337 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
RAB3BP20337 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAB3BP20337 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB3BP20337 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAB3BP20337 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAB3BP20337 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB3BP20337 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB3BP20337 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.75□□□□□ -0.21
RAB3BP20337 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB3BP20337 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB3BP20337 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB3BP20337 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
RAB3BP20337 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.75□□□□□ -0.21
RAB3BP20337 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB3BP20337 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC13.75□□□□□ -0.21
RAB3BP20337 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB3BP20337 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB3BP20337 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RAB3BP20337 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB3BP20337 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.75□□□□□ -0.21
RAB3BP20337 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.75□□□□□ -0.21
RAB3BP20337 AC091304.2-201ENST00000564639 760 ntBASIC13.75□□□□□ -0.21
RAB3BP20337 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.75□□□□□ -0.21
RAB3BP20337 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB3BP20337 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RAB3BP20337 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.75□□□□□ -0.21
RAB3BP20337 AL358472.4-201ENST00000633140 710 ntBASIC13.75□□□□□ -0.21
RAB3BP20337 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAB3BP20337 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
RAB3BP20337 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB3BP20337 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB3BP20337 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB3BP20337 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB3BP20337 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
RAB3BP20337 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB3BP20337 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB3BP20337 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB3BP20337 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RAB3BP20337 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB3BP20337 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RAB3BP20337 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.75□□□□□ -0.21
RAB3BP20337 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB3BP20337 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RAB3BP20337 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.75□□□□□ -0.21
RAB3BP20337 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
RAB3BP20337 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
RAB3BP20337 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAB3BP20337 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB3BP20337 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB3BP20337 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB3BP20337 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB3BP20337 AC006504.5-208ENST00000588784 2401 ntBASIC13.74□□□□□ -0.21
RAB3BP20337 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB3BP20337 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB3BP20337 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB3BP20337 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB3BP20337 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB3BP20337 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB3BP20337 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB3BP20337 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.74□□□□□ -0.21
RAB3BP20337 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
RAB3BP20337 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB3BP20337 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
RAB3BP20337 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
RAB3BP20337 LINC01230-201ENST00000625222 3017 ntBASIC13.74□□□□□ -0.21
RAB3BP20337 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB3BP20337 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
RAB3BP20337 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB3BP20337 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB3BP20337 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB3BP20337 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RAB3BP20337 AC004987.2-201ENST00000395959 1148 ntBASIC13.74□□□□□ -0.21
RAB3BP20337 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
RAB3BP20337 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.74□□□□□ -0.21
RAB3BP20337 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB3BP20337 PRSS29P-201ENST00000440800 595 ntBASIC13.74□□□□□ -0.21
RAB3BP20337 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.74□□□□□ -0.21
RAB3BP20337 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RAB3BP20337 AC024267.1-201ENST00000582320 895 ntBASIC13.74□□□□□ -0.21
RAB3BP20337 CLEC4GP1-201ENST00000596555 870 ntBASIC13.74□□□□□ -0.21
RAB3BP20337 AL450472.2-201ENST00000603663 1156 ntBASIC13.74□□□□□ -0.21
RAB3BP20337 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB3BP20337 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RAB3BP20337 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.74□□□□□ -0.21
RAB3BP20337 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB3BP20337 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
RAB3BP20337 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB3BP20337 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RAB3BP20337 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RAB3BP20337 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RAB3BP20337 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB3BP20337 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAB3BP20337 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RAB3BP20337 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RAB3BP20337 BX640514.1-201ENST00000583223 1918 ntBASIC13.74□□□□□ -0.21
RAB3BP20337 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.74□□□□□ -0.21
RAB3BP20337 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RAB3BP20337 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms