Protein–RNA interactions for Protein: P16383

GCFC2, GC-rich sequence DNA-binding factor 2, humanhuman

Known RBP Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2P16383 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.62■□□□□ 0.41
GCFC2P16383 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
GCFC2P16383 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GCFC2P16383 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GCFC2P16383 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
GCFC2P16383 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GCFC2P16383 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
GCFC2P16383 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GCFC2P16383 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GCFC2P16383 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
GCFC2P16383 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GCFC2P16383 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GCFC2P16383 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
GCFC2P16383 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GCFC2P16383 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GCFC2P16383 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GCFC2P16383 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
GCFC2P16383 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GCFC2P16383 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GCFC2P16383 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
GCFC2P16383 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GCFC2P16383 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.61■□□□□ 0.41
GCFC2P16383 MYCLP2-201ENST00000449268 967 ntBASIC17.61■□□□□ 0.41
GCFC2P16383 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.61■□□□□ 0.41
GCFC2P16383 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.61■□□□□ 0.41
GCFC2P16383 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.61■□□□□ 0.41
GCFC2P16383 AC026410.3-201ENST00000514280 936 ntBASIC17.61■□□□□ 0.41
GCFC2P16383 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.61■□□□□ 0.41
GCFC2P16383 MIR8072-201ENST00000614241 80 ntBASIC17.61■□□□□ 0.41
GCFC2P16383 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.61■□□□□ 0.41
GCFC2P16383 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GCFC2P16383 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GCFC2P16383 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.61■□□□□ 0.41
GCFC2P16383 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
GCFC2P16383 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.61■□□□□ 0.41
GCFC2P16383 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GCFC2P16383 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
GCFC2P16383 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GCFC2P16383 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
GCFC2P16383 AC112693.3-201ENST00000624819 1983 ntBASIC17.6■□□□□ 0.41
GCFC2P16383 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.6■□□□□ 0.41
GCFC2P16383 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GCFC2P16383 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GCFC2P16383 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GCFC2P16383 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GCFC2P16383 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.6■□□□□ 0.41
GCFC2P16383 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.6■□□□□ 0.41
GCFC2P16383 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GCFC2P16383 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GCFC2P16383 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GCFC2P16383 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GCFC2P16383 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GCFC2P16383 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GCFC2P16383 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GCFC2P16383 AC098850.1-201ENST00000419919 790 ntBASIC17.6■□□□□ 0.41
GCFC2P16383 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GCFC2P16383 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.6■□□□□ 0.41
GCFC2P16383 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GCFC2P16383 DRD5P1-201ENST00000456605 1438 ntBASIC17.6■□□□□ 0.41
GCFC2P16383 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GCFC2P16383 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GCFC2P16383 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GCFC2P16383 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GCFC2P16383 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GCFC2P16383 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GCFC2P16383 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GCFC2P16383 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.6■□□□□ 0.41
GCFC2P16383 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.6■□□□□ 0.41
GCFC2P16383 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GCFC2P16383 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GCFC2P16383 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GCFC2P16383 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
GCFC2P16383 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
GCFC2P16383 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GCFC2P16383 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.59■□□□□ 0.41
GCFC2P16383 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.59■□□□□ 0.41
GCFC2P16383 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GCFC2P16383 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GCFC2P16383 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GCFC2P16383 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.59■□□□□ 0.41
GCFC2P16383 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GCFC2P16383 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GCFC2P16383 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GCFC2P16383 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GCFC2P16383 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
GCFC2P16383 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GCFC2P16383 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.59■□□□□ 0.41
GCFC2P16383 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
GCFC2P16383 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.59■□□□□ 0.41
GCFC2P16383 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.59■□□□□ 0.41
GCFC2P16383 AC027307.3-201ENST00000594262 1100 ntBASIC17.59■□□□□ 0.41
GCFC2P16383 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
GCFC2P16383 AC008494.3-201ENST00000606615 944 ntBASIC17.59■□□□□ 0.41
GCFC2P16383 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GCFC2P16383 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GCFC2P16383 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.59■□□□□ 0.41
GCFC2P16383 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GCFC2P16383 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GCFC2P16383 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.59■□□□□ 0.41
GCFC2P16383 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms