Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.98■□□□□ 0.31
CCDC172P0C7W6 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC172P0C7W6 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC172P0C7W6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC172P0C7W6 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CCDC172P0C7W6 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC172P0C7W6 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
CCDC172P0C7W6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC172P0C7W6 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 HNRNPUP1-201ENST00000554987 333 ntBASIC16.97■□□□□ 0.31
CCDC172P0C7W6 AC105021.1-202ENST00000570572 669 ntBASIC16.97■□□□□ 0.31
CCDC172P0C7W6 MIR3687-2-201ENST00000577708 61 ntBASIC16.97■□□□□ 0.31
CCDC172P0C7W6 MIR3687-1-201ENST00000614492 61 ntBASIC16.97■□□□□ 0.31
CCDC172P0C7W6 AL513210.1-201ENST00000629608 234 ntBASIC16.97■□□□□ 0.31
CCDC172P0C7W6 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC172P0C7W6 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 AP000344.2-201ENST00000512987 629 ntBASIC16.96■□□□□ 0.31
CCDC172P0C7W6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 AC097359.3-201ENST00000603982 1210 ntBASIC16.96■□□□□ 0.31
CCDC172P0C7W6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.96■□□□□ 0.31
CCDC172P0C7W6 AL035456.1-201ENST00000456064 1369 ntBASIC16.96■□□□□ 0.31
CCDC172P0C7W6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 CR383656.2-201ENST00000548656 2254 ntBASIC16.96■□□□□ 0.31
CCDC172P0C7W6 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC172P0C7W6 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CCDC172P0C7W6 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.96■□□□□ 0.3
CCDC172P0C7W6 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CCDC172P0C7W6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms