Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 AL139400.1-201ENST00000366220 510 ntBASIC13.67□□□□□ -0.22
SFTPBP07988 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
SFTPBP07988 AL592309.1-201ENST00000443127 649 ntBASIC13.67□□□□□ -0.22
SFTPBP07988 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 AC098859.1-201ENST00000502915 1238 ntBASIC13.67□□□□□ -0.22
SFTPBP07988 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.67□□□□□ -0.22
SFTPBP07988 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.67□□□□□ -0.22
SFTPBP07988 AC093520.2-201ENST00000561830 333 ntBASIC13.67□□□□□ -0.22
SFTPBP07988 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.67□□□□□ -0.22
SFTPBP07988 AC027796.2-201ENST00000575326 344 ntBASIC13.67□□□□□ -0.22
SFTPBP07988 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.67□□□□□ -0.22
SFTPBP07988 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.67□□□□□ -0.22
SFTPBP07988 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.67□□□□□ -0.22
SFTPBP07988 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.67□□□□□ -0.22
SFTPBP07988 AC093028.1-201ENST00000622998 982 ntBASIC13.67□□□□□ -0.22
SFTPBP07988 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.67□□□□□ -0.22
SFTPBP07988 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.67□□□□□ -0.22
SFTPBP07988 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.67□□□□□ -0.22
SFTPBP07988 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
SFTPBP07988 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
SFTPBP07988 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.67□□□□□ -0.22
SFTPBP07988 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.67□□□□□ -0.22
SFTPBP07988 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.67□□□□□ -0.22
SFTPBP07988 AC020658.6-201ENST00000623564 1870 ntBASIC13.67□□□□□ -0.22
SFTPBP07988 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.67□□□□□ -0.22
SFTPBP07988 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.67□□□□□ -0.22
SFTPBP07988 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SFTPBP07988 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SFTPBP07988 AKAP8P1-201ENST00000434743 1349 ntBASIC13.66□□□□□ -0.22
SFTPBP07988 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SFTPBP07988 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SFTPBP07988 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SFTPBP07988 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SFTPBP07988 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SFTPBP07988 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SFTPBP07988 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SFTPBP07988 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.66□□□□□ -0.22
SFTPBP07988 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.66□□□□□ -0.22
SFTPBP07988 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SFTPBP07988 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SFTPBP07988 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.66□□□□□ -0.22
SFTPBP07988 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SFTPBP07988 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SFTPBP07988 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SFTPBP07988 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SFTPBP07988 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SFTPBP07988 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SFTPBP07988 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SFTPBP07988 FAM45BP-202ENST00000592932 1624 ntBASIC13.66□□□□□ -0.22
SFTPBP07988 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.66□□□□□ -0.22
SFTPBP07988 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SFTPBP07988 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.66□□□□□ -0.22
SFTPBP07988 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.66□□□□□ -0.22
SFTPBP07988 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.66□□□□□ -0.22
SFTPBP07988 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.66□□□□□ -0.22
SFTPBP07988 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SFTPBP07988 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
SFTPBP07988 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
SFTPBP07988 AC023141.5-201ENST00000458585 616 ntBASIC13.66□□□□□ -0.22
SFTPBP07988 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.66□□□□□ -0.22
SFTPBP07988 AC105233.2-201ENST00000523697 349 ntBASIC13.66□□□□□ -0.22
SFTPBP07988 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.66□□□□□ -0.22
SFTPBP07988 AF228730.5-201ENST00000530288 346 ntBASIC13.66□□□□□ -0.22
SFTPBP07988 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SFTPBP07988 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SFTPBP07988 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SFTPBP07988 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SFTPBP07988 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
SFTPBP07988 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.66□□□□□ -0.22
SFTPBP07988 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.66□□□□□ -0.22
SFTPBP07988 SPTSSB-204ENST00000617024 1292 ntBASIC13.66□□□□□ -0.22
SFTPBP07988 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.66□□□□□ -0.22
SFTPBP07988 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SFTPBP07988 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SFTPBP07988 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.66□□□□□ -0.22
SFTPBP07988 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SFTPBP07988 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.66□□□□□ -0.22
SFTPBP07988 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.66□□□□□ -0.22
SFTPBP07988 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.66□□□□□ -0.22
SFTPBP07988 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SFTPBP07988 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SFTPBP07988 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SFTPBP07988 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms