Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
GGPS1O95749 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
GGPS1O95749 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GGPS1O95749 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GGPS1O95749 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GGPS1O95749 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.47■□□□□ 0.39
GGPS1O95749 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GGPS1O95749 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GGPS1O95749 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GGPS1O95749 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.46■□□□□ 0.39
GGPS1O95749 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GGPS1O95749 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
GGPS1O95749 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GGPS1O95749 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GGPS1O95749 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.46■□□□□ 0.39
GGPS1O95749 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GGPS1O95749 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
GGPS1O95749 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GGPS1O95749 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GGPS1O95749 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GGPS1O95749 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GGPS1O95749 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
GGPS1O95749 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.46■□□□□ 0.39
GGPS1O95749 AC016694.1-201ENST00000434179 700 ntBASIC17.46■□□□□ 0.39
GGPS1O95749 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.46■□□□□ 0.39
GGPS1O95749 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GGPS1O95749 AC092658.1-201ENST00000505836 891 ntBASIC17.46■□□□□ 0.39
GGPS1O95749 AP000812.2-201ENST00000538934 718 ntBASIC17.46■□□□□ 0.39
GGPS1O95749 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.46■□□□□ 0.39
GGPS1O95749 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.46■□□□□ 0.39
GGPS1O95749 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.46■□□□□ 0.39
GGPS1O95749 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.46■□□□□ 0.39
GGPS1O95749 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.46■□□□□ 0.39
GGPS1O95749 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GGPS1O95749 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GGPS1O95749 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GGPS1O95749 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
GGPS1O95749 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.46■□□□□ 0.39
GGPS1O95749 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.46■□□□□ 0.39
GGPS1O95749 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GGPS1O95749 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GGPS1O95749 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GGPS1O95749 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GGPS1O95749 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GGPS1O95749 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.46■□□□□ 0.38
GGPS1O95749 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GGPS1O95749 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
GGPS1O95749 AL138799.1-201ENST00000448213 1675 ntBASIC17.45■□□□□ 0.38
GGPS1O95749 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.45■□□□□ 0.38
GGPS1O95749 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GGPS1O95749 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
GGPS1O95749 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
GGPS1O95749 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GGPS1O95749 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
GGPS1O95749 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GGPS1O95749 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
GGPS1O95749 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
GGPS1O95749 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.45■□□□□ 0.38
GGPS1O95749 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.45■□□□□ 0.38
GGPS1O95749 AC010491.1-201ENST00000563101 2797 ntBASIC17.45■□□□□ 0.38
GGPS1O95749 CSF2RBP1-201ENST00000447905 391 ntBASIC17.45■□□□□ 0.38
GGPS1O95749 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
GGPS1O95749 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.45■□□□□ 0.38
GGPS1O95749 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.45■□□□□ 0.38
GGPS1O95749 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.45■□□□□ 0.38
GGPS1O95749 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.45■□□□□ 0.38
GGPS1O95749 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GGPS1O95749 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.45■□□□□ 0.38
GGPS1O95749 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.45■□□□□ 0.38
GGPS1O95749 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.45■□□□□ 0.38
GGPS1O95749 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GGPS1O95749 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GGPS1O95749 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.45■□□□□ 0.38
GGPS1O95749 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GGPS1O95749 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
GGPS1O95749 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
GGPS1O95749 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
GGPS1O95749 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
GGPS1O95749 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GGPS1O95749 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
GGPS1O95749 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
GGPS1O95749 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.44■□□□□ 0.38
GGPS1O95749 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GGPS1O95749 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GGPS1O95749 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.44■□□□□ 0.38
GGPS1O95749 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GGPS1O95749 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.44■□□□□ 0.38
GGPS1O95749 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
GGPS1O95749 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.44■□□□□ 0.38
GGPS1O95749 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
GGPS1O95749 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.44■□□□□ 0.38
GGPS1O95749 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
GGPS1O95749 FO681548.1-201ENST00000455617 1132 ntBASIC17.44■□□□□ 0.38
GGPS1O95749 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.44■□□□□ 0.38
GGPS1O95749 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.44■□□□□ 0.38
GGPS1O95749 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
GGPS1O95749 GNRHR2-203ENST00000581100 1187 ntBASIC17.44■□□□□ 0.38
GGPS1O95749 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
GGPS1O95749 AC025181.2-201ENST00000606994 802 ntBASIC17.44■□□□□ 0.38
GGPS1O95749 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms