Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.71■□□□□ 0.11
RFPL1O75677 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.71■□□□□ 0.11
RFPL1O75677 TERF1P3-201ENST00000505638 1227 ntBASIC15.71■□□□□ 0.11
RFPL1O75677 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.71■□□□□ 0.11
RFPL1O75677 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.71■□□□□ 0.11
RFPL1O75677 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.71■□□□□ 0.11
RFPL1O75677 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.71■□□□□ 0.11
RFPL1O75677 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.71■□□□□ 0.11
RFPL1O75677 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.71■□□□□ 0.11
RFPL1O75677 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.71■□□□□ 0.11
RFPL1O75677 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.71■□□□□ 0.11
RFPL1O75677 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RFPL1O75677 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RFPL1O75677 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.71■□□□□ 0.11
RFPL1O75677 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.71■□□□□ 0.11
RFPL1O75677 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RFPL1O75677 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
RFPL1O75677 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFPL1O75677 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFPL1O75677 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFPL1O75677 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFPL1O75677 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
RFPL1O75677 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RFPL1O75677 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
RFPL1O75677 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RFPL1O75677 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
RFPL1O75677 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RFPL1O75677 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.71■□□□□ 0.1
RFPL1O75677 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.71■□□□□ 0.1
RFPL1O75677 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
RFPL1O75677 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFPL1O75677 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFPL1O75677 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFPL1O75677 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFPL1O75677 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFPL1O75677 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.7■□□□□ 0.1
RFPL1O75677 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RFPL1O75677 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFPL1O75677 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFPL1O75677 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFPL1O75677 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.7■□□□□ 0.1
RFPL1O75677 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFPL1O75677 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFPL1O75677 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFPL1O75677 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.7■□□□□ 0.1
RFPL1O75677 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFPL1O75677 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFPL1O75677 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.7■□□□□ 0.1
RFPL1O75677 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
RFPL1O75677 FAM58DP-201ENST00000428076 619 ntBASIC15.7■□□□□ 0.1
RFPL1O75677 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.7■□□□□ 0.1
RFPL1O75677 RBPMS2P1-201ENST00000437762 623 ntBASIC15.7■□□□□ 0.1
RFPL1O75677 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.7■□□□□ 0.1
RFPL1O75677 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFPL1O75677 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.7■□□□□ 0.1
RFPL1O75677 AP000842.3-202ENST00000569238 1080 ntBASIC15.7■□□□□ 0.1
RFPL1O75677 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.7■□□□□ 0.1
RFPL1O75677 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFPL1O75677 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.7■□□□□ 0.1
RFPL1O75677 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
RFPL1O75677 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RFPL1O75677 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFPL1O75677 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFPL1O75677 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFPL1O75677 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.7■□□□□ 0.1
RFPL1O75677 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.7■□□□□ 0.1
RFPL1O75677 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.7■□□□□ 0.1
RFPL1O75677 AL607033.1-201ENST00000623900 1599 ntBASIC15.7■□□□□ 0.1
RFPL1O75677 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFPL1O75677 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFPL1O75677 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.7■□□□□ 0.1
RFPL1O75677 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFPL1O75677 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFPL1O75677 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFPL1O75677 AC005912.2-201ENST00000619492 2400 ntBASIC15.69■□□□□ 0.1
RFPL1O75677 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFPL1O75677 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFPL1O75677 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFPL1O75677 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
RFPL1O75677 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFPL1O75677 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFPL1O75677 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFPL1O75677 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.69■□□□□ 0.1
RFPL1O75677 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFPL1O75677 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
RFPL1O75677 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RFPL1O75677 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFPL1O75677 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.69■□□□□ 0.1
RFPL1O75677 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.69■□□□□ 0.1
RFPL1O75677 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFPL1O75677 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFPL1O75677 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFPL1O75677 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.69■□□□□ 0.1
RFPL1O75677 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFPL1O75677 AC136604.1-201ENST00000418535 575 ntBASIC15.69■□□□□ 0.1
RFPL1O75677 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.69■□□□□ 0.1
RFPL1O75677 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.69■□□□□ 0.1
RFPL1O75677 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.69■□□□□ 0.1
RFPL1O75677 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.69■□□□□ 0.1
RFPL1O75677 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms