Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 INO80E-209ENST00000567254 625 ntTSL 2 BASIC6.78□□□□□ -1.32
USH2AO75445 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC6.78□□□□□ -1.32
USH2AO75445 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC6.78□□□□□ -1.32
USH2AO75445 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC6.78□□□□□ -1.32
USH2AO75445 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC6.78□□□□□ -1.32
USH2AO75445 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC6.78□□□□□ -1.32
USH2AO75445 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC6.78□□□□□ -1.32
USH2AO75445 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
USH2AO75445 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC6.78□□□□□ -1.32
USH2AO75445 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.32
USH2AO75445 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
USH2AO75445 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
USH2AO75445 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC6.77□□□□□ -1.33
USH2AO75445 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC6.77□□□□□ -1.33
USH2AO75445 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC6.77□□□□□ -1.33
USH2AO75445 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC6.77□□□□□ -1.33
USH2AO75445 AC090510.3-201ENST00000615831 821 ntBASIC6.77□□□□□ -1.33
USH2AO75445 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
USH2AO75445 CMC2-224ENST00000630396 481 ntTSL 5 BASIC6.77□□□□□ -1.33
USH2AO75445 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC6.77□□□□□ -1.33
USH2AO75445 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USH2AO75445 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USH2AO75445 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
USH2AO75445 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC6.77□□□□□ -1.33
USH2AO75445 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
USH2AO75445 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USH2AO75445 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
USH2AO75445 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
USH2AO75445 CASP2-203ENST00000392925 616 ntTSL 3 BASIC6.77□□□□□ -1.33
USH2AO75445 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC6.77□□□□□ -1.33
USH2AO75445 AC008723.1-201ENST00000506922 207 ntBASIC6.77□□□□□ -1.33
USH2AO75445 AC011462.4-201ENST00000616866 449 ntBASIC6.77□□□□□ -1.33
USH2AO75445 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC6.77□□□□□ -1.33
USH2AO75445 AC011840.2-201ENST00000563063 1520 ntBASIC6.77□□□□□ -1.33
USH2AO75445 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USH2AO75445 AC060834.1-201ENST00000443027 2032 ntBASIC6.77□□□□□ -1.33
USH2AO75445 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USH2AO75445 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
USH2AO75445 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
USH2AO75445 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
USH2AO75445 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
USH2AO75445 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USH2AO75445 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
USH2AO75445 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USH2AO75445 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
USH2AO75445 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USH2AO75445 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
USH2AO75445 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
USH2AO75445 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC6.77□□□□□ -1.33
USH2AO75445 AHCYP3-201ENST00000420053 1279 ntBASIC6.77□□□□□ -1.33
USH2AO75445 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
USH2AO75445 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USH2AO75445 AC083801.1-201ENST00000491689 358 ntBASIC6.77□□□□□ -1.33
USH2AO75445 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
USH2AO75445 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC6.77□□□□□ -1.33
USH2AO75445 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC6.77□□□□□ -1.33
USH2AO75445 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC6.77□□□□□ -1.33
USH2AO75445 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC6.77□□□□□ -1.33
USH2AO75445 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
USH2AO75445 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
USH2AO75445 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC6.77□□□□□ -1.33
USH2AO75445 LINC01165-201ENST00000445190 1623 ntBASIC6.77□□□□□ -1.33
USH2AO75445 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC6.77□□□□□ -1.33
USH2AO75445 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USH2AO75445 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
USH2AO75445 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USH2AO75445 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USH2AO75445 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC6.77□□□□□ -1.33
USH2AO75445 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
USH2AO75445 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USH2AO75445 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USH2AO75445 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
USH2AO75445 EIF3FP3-201ENST00000434851 1086 ntBASIC6.77□□□□□ -1.33
USH2AO75445 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC6.77□□□□□ -1.33
USH2AO75445 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC6.77□□□□□ -1.33
USH2AO75445 AC022616.1-201ENST00000518688 554 ntBASIC6.77□□□□□ -1.33
USH2AO75445 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC6.77□□□□□ -1.33
USH2AO75445 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC6.77□□□□□ -1.33
USH2AO75445 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC6.77□□□□□ -1.33
USH2AO75445 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC6.77□□□□□ -1.33
USH2AO75445 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USH2AO75445 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC6.77□□□□□ -1.33
USH2AO75445 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USH2AO75445 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
USH2AO75445 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC6.77□□□□□ -1.33
USH2AO75445 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
USH2AO75445 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
USH2AO75445 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
USH2AO75445 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
USH2AO75445 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
USH2AO75445 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
USH2AO75445 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC6.76□□□□□ -1.33
USH2AO75445 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
USH2AO75445 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms