Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.65□□□□□ -0.06
TRIM3O75382 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM3O75382 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.65□□□□□ -0.06
TRIM3O75382 AL033527.5-202ENST00000641632 1098 ntBASIC14.65□□□□□ -0.06
TRIM3O75382 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM3O75382 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM3O75382 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TRIM3O75382 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM3O75382 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
TRIM3O75382 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
TRIM3O75382 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TRIM3O75382 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.65□□□□□ -0.06
TRIM3O75382 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM3O75382 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
TRIM3O75382 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM3O75382 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM3O75382 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.64□□□□□ -0.07
TRIM3O75382 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM3O75382 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM3O75382 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM3O75382 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.64□□□□□ -0.07
TRIM3O75382 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.64□□□□□ -0.07
TRIM3O75382 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM3O75382 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM3O75382 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
TRIM3O75382 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.64□□□□□ -0.07
TRIM3O75382 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.64□□□□□ -0.07
TRIM3O75382 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM3O75382 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM3O75382 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM3O75382 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM3O75382 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM3O75382 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM3O75382 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
TRIM3O75382 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
TRIM3O75382 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
TRIM3O75382 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM3O75382 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM3O75382 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.64□□□□□ -0.07
TRIM3O75382 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
TRIM3O75382 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM3O75382 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.64□□□□□ -0.07
TRIM3O75382 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM3O75382 MIR661-201ENST00000384842 89 ntBASIC14.64□□□□□ -0.07
TRIM3O75382 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.64□□□□□ -0.07
TRIM3O75382 FAM207CP-201ENST00000443486 507 ntBASIC14.64□□□□□ -0.07
TRIM3O75382 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TRIM3O75382 RN7SL618P-201ENST00000477850 296 ntBASIC14.64□□□□□ -0.07
TRIM3O75382 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM3O75382 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.64□□□□□ -0.07
TRIM3O75382 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.64□□□□□ -0.07
TRIM3O75382 AC010336.2-201ENST00000564226 506 ntBASIC14.64□□□□□ -0.07
TRIM3O75382 RN7SL204P-201ENST00000582831 262 ntBASIC14.64□□□□□ -0.07
TRIM3O75382 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TRIM3O75382 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
TRIM3O75382 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM3O75382 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TRIM3O75382 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM3O75382 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM3O75382 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM3O75382 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM3O75382 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM3O75382 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM3O75382 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.64□□□□□ -0.07
TRIM3O75382 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TRIM3O75382 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM3O75382 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.64□□□□□ -0.07
TRIM3O75382 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM3O75382 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TRIM3O75382 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.64□□□□□ -0.07
TRIM3O75382 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM3O75382 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM3O75382 LINC02447-202ENST00000501888 2146 ntBASIC14.63□□□□□ -0.07
TRIM3O75382 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.63□□□□□ -0.07
TRIM3O75382 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM3O75382 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM3O75382 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM3O75382 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRIM3O75382 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRIM3O75382 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.63□□□□□ -0.07
TRIM3O75382 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM3O75382 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM3O75382 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM3O75382 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM3O75382 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.63□□□□□ -0.07
TRIM3O75382 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM3O75382 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM3O75382 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRIM3O75382 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM3O75382 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TRIM3O75382 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.63□□□□□ -0.07
TRIM3O75382 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM3O75382 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM3O75382 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TRIM3O75382 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRIM3O75382 FO393414.2-201ENST00000405153 598 ntBASIC14.63□□□□□ -0.07
TRIM3O75382 HAUS4P1-201ENST00000406739 1145 ntBASIC14.63□□□□□ -0.07
TRIM3O75382 AC002472.2-201ENST00000442739 958 ntBASIC14.63□□□□□ -0.07
TRIM3O75382 EEF1DP4-201ENST00000446006 880 ntBASIC14.63□□□□□ -0.07
TRIM3O75382 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms