Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.08■□□□□ 0
CPNE3O75131 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CPNE3O75131 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.08■□□□□ 0
CPNE3O75131 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CPNE3O75131 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.07■□□□□ 0
CPNE3O75131 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE3O75131 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE3O75131 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE3O75131 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.07■□□□□ 0
CPNE3O75131 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.07■□□□□ 0
CPNE3O75131 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE3O75131 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CPNE3O75131 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CPNE3O75131 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.07■□□□□ 0
CPNE3O75131 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE3O75131 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.07■□□□□ 0
CPNE3O75131 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
CPNE3O75131 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.07■□□□□ 0
CPNE3O75131 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.07■□□□□ 0
CPNE3O75131 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE3O75131 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
CPNE3O75131 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
CPNE3O75131 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.07■□□□□ 0
CPNE3O75131 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.07■□□□□ 0
CPNE3O75131 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CPNE3O75131 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.07■□□□□ 0
CPNE3O75131 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.07■□□□□ 0
CPNE3O75131 LINC01115-203ENST00000606068 577 ntBASIC15.07■□□□□ 0
CPNE3O75131 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.07■□□□□ 0
CPNE3O75131 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE3O75131 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE3O75131 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.07■□□□□ 0
CPNE3O75131 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.07■□□□□ 0
CPNE3O75131 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CPNE3O75131 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CPNE3O75131 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE3O75131 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.07■□□□□ 0
CPNE3O75131 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.07■□□□□ 0
CPNE3O75131 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE3O75131 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE3O75131 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE3O75131 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.07■□□□□ 0
CPNE3O75131 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE3O75131 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.07■□□□□ 0
CPNE3O75131 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CPNE3O75131 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
CPNE3O75131 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.06■□□□□ 0
CPNE3O75131 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.06■□□□□ 0
CPNE3O75131 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CPNE3O75131 AC067930.6-201ENST00000623257 4947 ntBASIC15.06■□□□□ 0
CPNE3O75131 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CPNE3O75131 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CPNE3O75131 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.06■□□□□ 0
CPNE3O75131 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CPNE3O75131 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
CPNE3O75131 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
CPNE3O75131 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.06■□□□□ 0
CPNE3O75131 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.06■□□□□ 0
CPNE3O75131 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE3O75131 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE3O75131 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CPNE3O75131 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
CPNE3O75131 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.06■□□□□ 0
CPNE3O75131 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.06■□□□□ 0
CPNE3O75131 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.06■□□□□ 0
CPNE3O75131 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE3O75131 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
CPNE3O75131 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.06■□□□□ 0
CPNE3O75131 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE3O75131 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CPNE3O75131 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.06■□□□□ 0
CPNE3O75131 U91328.1-201ENST00000437528 223 ntBASIC15.06■□□□□ 0
CPNE3O75131 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.06■□□□□ 0
CPNE3O75131 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.06■□□□□ 0
CPNE3O75131 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.06■□□□□ 0
CPNE3O75131 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.06■□□□□ 0
CPNE3O75131 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.06■□□□□ 0
CPNE3O75131 AC132938.2-201ENST00000579188 680 ntBASIC15.06■□□□□ 0
CPNE3O75131 CTBP2P3-201ENST00000585629 1255 ntBASIC15.06■□□□□ 0
CPNE3O75131 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.06■□□□□ 0
CPNE3O75131 AL359881.2-201ENST00000602973 570 ntBASIC15.06■□□□□ 0
CPNE3O75131 TMEM261P1-201ENST00000604899 340 ntBASIC15.06■□□□□ 0
CPNE3O75131 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.06■□□□□ 0
CPNE3O75131 AC244517.3-201ENST00000616254 1235 ntBASIC15.06■□□□□ 0
CPNE3O75131 AL591163.1-201ENST00000641757 987 ntBASIC15.06■□□□□ 0
CPNE3O75131 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE3O75131 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CPNE3O75131 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE3O75131 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
CPNE3O75131 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
CPNE3O75131 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CPNE3O75131 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.06■□□□□ 0
CPNE3O75131 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.06■□□□□ 0
CPNE3O75131 CLK3P2-201ENST00000427566 1453 ntBASIC15.06■□□□□ 0
CPNE3O75131 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CPNE3O75131 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CPNE3O75131 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
CPNE3O75131 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.06■□□□□ 0
CPNE3O75131 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
CPNE3O75131 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms