Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.61□□□□□ -0.07
FOXS1O43638 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
FOXS1O43638 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
FOXS1O43638 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
FOXS1O43638 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FOXS1O43638 MSTO2P-201ENST00000314835 1709 ntBASIC14.61□□□□□ -0.07
FOXS1O43638 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
FOXS1O43638 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.61□□□□□ -0.07
FOXS1O43638 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FOXS1O43638 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXS1O43638 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXS1O43638 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
FOXS1O43638 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FOXS1O43638 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXS1O43638 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
FOXS1O43638 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.6□□□□□ -0.07
FOXS1O43638 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXS1O43638 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXS1O43638 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FOXS1O43638 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXS1O43638 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXS1O43638 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXS1O43638 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXS1O43638 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXS1O43638 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.6□□□□□ -0.07
FOXS1O43638 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.6□□□□□ -0.07
FOXS1O43638 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.6□□□□□ -0.07
FOXS1O43638 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.6□□□□□ -0.07
FOXS1O43638 TDH-203ENST00000531764 1110 ntBASIC14.6□□□□□ -0.07
FOXS1O43638 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.6□□□□□ -0.07
FOXS1O43638 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
FOXS1O43638 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXS1O43638 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.6□□□□□ -0.07
FOXS1O43638 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.6□□□□□ -0.07
FOXS1O43638 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
FOXS1O43638 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
FOXS1O43638 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
FOXS1O43638 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
FOXS1O43638 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.6□□□□□ -0.07
FOXS1O43638 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FOXS1O43638 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FOXS1O43638 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FOXS1O43638 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.6□□□□□ -0.07
FOXS1O43638 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.6□□□□□ -0.07
FOXS1O43638 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
FOXS1O43638 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FOXS1O43638 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FOXS1O43638 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
FOXS1O43638 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXS1O43638 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FOXS1O43638 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FOXS1O43638 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXS1O43638 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
FOXS1O43638 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXS1O43638 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.59□□□□□ -0.07
FOXS1O43638 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.59□□□□□ -0.07
FOXS1O43638 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.59□□□□□ -0.07
FOXS1O43638 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXS1O43638 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.59□□□□□ -0.07
FOXS1O43638 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXS1O43638 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FOXS1O43638 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXS1O43638 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FOXS1O43638 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.59□□□□□ -0.07
FOXS1O43638 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
FOXS1O43638 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
FOXS1O43638 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
FOXS1O43638 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FOXS1O43638 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.59□□□□□ -0.07
FOXS1O43638 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
FOXS1O43638 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FOXS1O43638 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.59□□□□□ -0.07
FOXS1O43638 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FOXS1O43638 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXS1O43638 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
FOXS1O43638 ACKR1-201ENST00000368121 1240 ntBASIC14.59□□□□□ -0.07
FOXS1O43638 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
FOXS1O43638 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FOXS1O43638 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FOXS1O43638 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXS1O43638 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
FOXS1O43638 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FOXS1O43638 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
FOXS1O43638 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FOXS1O43638 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.59□□□□□ -0.07
FOXS1O43638 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.59□□□□□ -0.07
FOXS1O43638 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.59□□□□□ -0.07
FOXS1O43638 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.59□□□□□ -0.07
FOXS1O43638 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.59□□□□□ -0.07
FOXS1O43638 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.59□□□□□ -0.07
FOXS1O43638 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
FOXS1O43638 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXS1O43638 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.59□□□□□ -0.07
FOXS1O43638 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.59□□□□□ -0.07
FOXS1O43638 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.59□□□□□ -0.07
FOXS1O43638 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.59□□□□□ -0.07
FOXS1O43638 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FOXS1O43638 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.59□□□□□ -0.07
FOXS1O43638 AC112693.3-201ENST00000624819 1983 ntBASIC14.59□□□□□ -0.07
FOXS1O43638 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms