Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCNQ3O43525 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCNQ3O43525 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
KCNQ3O43525 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCNQ3O43525 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.81■□□□□ 0.76
KCNQ3O43525 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCNQ3O43525 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
KCNQ3O43525 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
KCNQ3O43525 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCNQ3O43525 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCNQ3O43525 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCNQ3O43525 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC19.81■□□□□ 0.76
KCNQ3O43525 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCNQ3O43525 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
KCNQ3O43525 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC19.8■□□□□ 0.76
KCNQ3O43525 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCNQ3O43525 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCNQ3O43525 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC19.8■□□□□ 0.76
KCNQ3O43525 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCNQ3O43525 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCNQ3O43525 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.8■□□□□ 0.76
KCNQ3O43525 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KCNQ3O43525 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
KCNQ3O43525 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KCNQ3O43525 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.8■□□□□ 0.76
KCNQ3O43525 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KCNQ3O43525 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCNQ3O43525 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCNQ3O43525 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCNQ3O43525 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KCNQ3O43525 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC19.8■□□□□ 0.76
KCNQ3O43525 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCNQ3O43525 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
KCNQ3O43525 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KCNQ3O43525 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KCNQ3O43525 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC19.8■□□□□ 0.76
KCNQ3O43525 AP003171.2-201ENST00000528208 925 ntBASIC19.8■□□□□ 0.76
KCNQ3O43525 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
KCNQ3O43525 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC19.8■□□□□ 0.76
KCNQ3O43525 AGER-214ENST00000538695 487 ntTSL 2 BASIC19.8■□□□□ 0.76
KCNQ3O43525 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KCNQ3O43525 DERL2-202ENST00000570848 657 ntTSL 5 BASIC19.8■□□□□ 0.76
KCNQ3O43525 SAMD11P1-201ENST00000571429 661 ntBASIC19.8■□□□□ 0.76
KCNQ3O43525 INO80C-210ENST00000590757 595 ntTSL 2 BASIC19.8■□□□□ 0.76
KCNQ3O43525 AL118558.3-201ENST00000607414 1079 ntBASIC19.8■□□□□ 0.76
KCNQ3O43525 PRKN-211ENST00000615065 261 ntTSL 5 BASIC19.8■□□□□ 0.76
KCNQ3O43525 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KCNQ3O43525 CICP11-201ENST00000434745 2827 ntBASIC19.8■□□□□ 0.76
KCNQ3O43525 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCNQ3O43525 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCNQ3O43525 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCNQ3O43525 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCNQ3O43525 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC19.8■□□□□ 0.76
KCNQ3O43525 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC19.8■□□□□ 0.76
KCNQ3O43525 AL359258.3-201ENST00000622910 2331 ntBASIC19.8■□□□□ 0.76
KCNQ3O43525 MST1L-201ENST00000442552 2185 ntBASIC19.8■□□□□ 0.76
KCNQ3O43525 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KCNQ3O43525 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCNQ3O43525 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCNQ3O43525 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC19.79■□□□□ 0.76
KCNQ3O43525 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.79■□□□□ 0.76
KCNQ3O43525 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.79■□□□□ 0.76
KCNQ3O43525 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCNQ3O43525 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCNQ3O43525 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KCNQ3O43525 REXO1L5P-201ENST00000622260 2098 ntBASIC19.79■□□□□ 0.76
KCNQ3O43525 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
KCNQ3O43525 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCNQ3O43525 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
KCNQ3O43525 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
KCNQ3O43525 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCNQ3O43525 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KCNQ3O43525 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCNQ3O43525 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCNQ3O43525 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
KCNQ3O43525 LSM5-207ENST00000410044 687 ntTSL 3 BASIC19.79■□□□□ 0.76
KCNQ3O43525 HLA-K-203ENST00000430151 1046 ntBASIC19.79■□□□□ 0.76
KCNQ3O43525 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC19.79■□□□□ 0.76
KCNQ3O43525 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC19.79■□□□□ 0.76
KCNQ3O43525 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC19.79■□□□□ 0.76
KCNQ3O43525 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC19.79■□□□□ 0.76
KCNQ3O43525 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC19.79■□□□□ 0.76
KCNQ3O43525 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC19.79■□□□□ 0.76
KCNQ3O43525 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCNQ3O43525 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.79■□□□□ 0.76
KCNQ3O43525 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC19.79■□□□□ 0.76
KCNQ3O43525 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCNQ3O43525 STK33-217ENST00000534493 1895 ntTSL 2 BASIC19.79■□□□□ 0.76
KCNQ3O43525 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCNQ3O43525 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KCNQ3O43525 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCNQ3O43525 SLC9A7P1-202ENST00000556476 2239 ntBASIC19.79■□□□□ 0.76
KCNQ3O43525 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KCNQ3O43525 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KCNQ3O43525 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KCNQ3O43525 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KCNQ3O43525 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.79■□□□□ 0.76
KCNQ3O43525 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
KCNQ3O43525 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
KCNQ3O43525 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms