Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NPIPA3F8WFD2 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 PHKG1P2-201ENST00000457537 863 ntBASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 AC092552.1-201ENST00000547243 906 ntBASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 RAB43P1-201ENST00000561790 589 ntBASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 AL450472.2-201ENST00000603663 1156 ntBASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 AC017083.2-201ENST00000608069 979 ntBASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 AL162274.1-201ENST00000617191 1098 ntBASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.25□□□□□ -0.13
NPIPA3F8WFD2 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 AC112492.5-201ENST00000421897 457 ntBASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 RPL13P2-201ENST00000440687 659 ntBASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 AC007389.4-201ENST00000454674 793 ntBASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 MIR6752-201ENST00000618442 71 ntBASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 AL158212.4-201ENST00000624062 1286 ntBASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NPIPA3F8WFD2 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms