Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 AL355306.1-201ENST00000415580 579 ntBASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 GPX1P2-201ENST00000429271 606 ntBASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 AL135744.1-201ENST00000565098 629 ntBASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 AC232323.1-201ENST00000540724 2099 ntBASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 REXO1L5P-201ENST00000622260 2098 ntBASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 AC007191.1-201ENST00000623179 2995 ntBASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF103-CHMP3A0A140T963 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 LINC00552-201ENST00000625151 2579 ntBASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 AC105250.1-201ENST00000509378 2057 ntBASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 AC098859.1-201ENST00000502915 1238 ntBASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 AKAP8P1-201ENST00000434743 1349 ntBASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF103-CHMP3A0A140T963 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
RNF103-CHMP3A0A140T963 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms