Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 CMC1-204ENST00000423894 549 ntTSL 2 BASIC19.55■□□□□ 0.72
LOC102724428A0A0B4J2F2 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
LOC102724428A0A0B4J2F2 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC19.55■□□□□ 0.72
LOC102724428A0A0B4J2F2 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC19.55■□□□□ 0.72
LOC102724428A0A0B4J2F2 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LOC102724428A0A0B4J2F2 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LOC102724428A0A0B4J2F2 AC018635.2-201ENST00000608625 364 ntBASIC19.55■□□□□ 0.72
LOC102724428A0A0B4J2F2 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC19.55■□□□□ 0.72
LOC102724428A0A0B4J2F2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.55■□□□□ 0.72
LOC102724428A0A0B4J2F2 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
LOC102724428A0A0B4J2F2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
LOC102724428A0A0B4J2F2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LOC102724428A0A0B4J2F2 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LOC102724428A0A0B4J2F2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
LOC102724428A0A0B4J2F2 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
LOC102724428A0A0B4J2F2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 AC004899.1-201ENST00000424687 1714 ntBASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 MTHFR-217ENST00000641820 1569 ntBASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 UFM1-202ENST00000379649 846 ntTSL 4 BASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 SLC16A6P1-201ENST00000413214 1059 ntBASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 PARVG-202ENST00000415224 999 ntTSL 2 BASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 MIR4783-201ENST00000580343 82 ntBASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 RN7SL163P-201ENST00000583100 276 ntBASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 AL805961.1-203ENST00000641078 1258 ntBASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 AC079328.2-201ENST00000561241 3354 ntBASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LOC102724428A0A0B4J2F2 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 RPL17P11-201ENST00000417593 544 ntBASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 AL596276.2-201ENST00000447525 331 ntBASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 MBP-227ENST00000526111 581 ntTSL 4 BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 DUX4L47-201ENST00000566374 394 ntBASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 SYT17-208ENST00000568433 812 ntTSL 3 BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 AP000346.4-201ENST00000614827 381 ntBASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LOC102724428A0A0B4J2F2 AC006480.2-201ENST00000609770 1337 ntBASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
LOC102724428A0A0B4J2F2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms