Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 AL645937.2-201ENST00000396808 931 ntBASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 FXNP2-201ENST00000411625 547 ntBASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 AC007787.1-201ENST00000588095 1583 ntBASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 AL158070.2-201ENST00000623713 1621 ntBASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.15■□□□□ 0.18
HCFC2Q9Y5Z7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 MIR769-201ENST00000390225 118 ntBASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 SPTLC1P5-201ENST00000450718 252 ntBASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 AC004066.1-201ENST00000502488 802 ntBASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 AC245884.6-201ENST00000515672 1067 ntBASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 RN7SL713P-201ENST00000582127 302 ntBASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 OR10B1P-201ENST00000601666 907 ntBASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 AC073413.1-201ENST00000603927 732 ntBASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 AP001505.2-201ENST00000616815 443 ntBASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 CU633904.3-201ENST00000624042 1029 ntBASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 AC124067.4-201ENST00000519691 2379 ntBASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC2Q9Y5Z7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 EIF3FP3-201ENST00000434851 1086 ntBASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 AP003171.2-201ENST00000528208 925 ntBASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 AC005730.2-201ENST00000564549 1184 ntBASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 ZACNP1-201ENST00000612259 710 ntBASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.13■□□□□ 0.17
HCFC2Q9Y5Z7 AP003680.1-201ENST00000598970 3660 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms