Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 AC087481.3-201ENST00000602886 1894 ntBASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL4A3BPQ9Y5P4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 AC144831.1-201ENST00000573312 2656 ntBASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 AC090616.6-203ENST00000579186 1945 ntBASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 NME2P1-201ENST00000426182 414 ntBASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 AC123567.1-201ENST00000548294 1261 ntBASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 AC093726.1-201ENST00000608064 963 ntBASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.47■□□□□ 0.39
COL4A3BPQ9Y5P4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 AC138969.3-201ENST00000546612 1459 ntBASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 AC138932.2-201ENST00000548268 1459 ntBASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 AC126755.4-201ENST00000549796 1459 ntBASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 AC098614.1-201ENST00000368528 745 ntBASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 KRT18P64-201ENST00000434946 1219 ntBASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 MYCLP2-201ENST00000449268 967 ntBASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 SLED1-202ENST00000512051 380 ntBASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 CR383656.12-201ENST00000549567 513 ntBASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 AL391069.4-201ENST00000609583 481 ntBASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 AL158212.4-201ENST00000624062 1286 ntBASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 TSPY26P-202ENST00000565928 3884 ntBASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COL4A3BPQ9Y5P4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
COL4A3BPQ9Y5P4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
COL4A3BPQ9Y5P4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
COL4A3BPQ9Y5P4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
COL4A3BPQ9Y5P4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
COL4A3BPQ9Y5P4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.45■□□□□ 0.38
COL4A3BPQ9Y5P4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.45■□□□□ 0.38
COL4A3BPQ9Y5P4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COL4A3BPQ9Y5P4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms