Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP15Q9Y4E8 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP15Q9Y4E8 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.9■□□□□ 0.3
USP15Q9Y4E8 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.9■□□□□ 0.3
USP15Q9Y4E8 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.9■□□□□ 0.3
USP15Q9Y4E8 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USP15Q9Y4E8 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
USP15Q9Y4E8 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USP15Q9Y4E8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USP15Q9Y4E8 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USP15Q9Y4E8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
USP15Q9Y4E8 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
USP15Q9Y4E8 AL596087.1-201ENST00000400979 1969 ntBASIC16.89■□□□□ 0.3
USP15Q9Y4E8 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.89■□□□□ 0.29
USP15Q9Y4E8 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 RNA5SP412-201ENST00000516234 123 ntBASIC16.89■□□□□ 0.29
USP15Q9Y4E8 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.89■□□□□ 0.29
USP15Q9Y4E8 MIR5189-201ENST00000577370 114 ntBASIC16.89■□□□□ 0.29
USP15Q9Y4E8 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 AC073347.1-201ENST00000421633 2643 ntBASIC16.89■□□□□ 0.29
USP15Q9Y4E8 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP15Q9Y4E8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 KRT8P22-201ENST00000562317 1415 ntBASIC16.88■□□□□ 0.29
USP15Q9Y4E8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 CSF2RBP1-201ENST00000447905 391 ntBASIC16.88■□□□□ 0.29
USP15Q9Y4E8 AC108725.1-201ENST00000495472 409 ntBASIC16.88■□□□□ 0.29
USP15Q9Y4E8 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 AL022328.1-201ENST00000610050 478 ntBASIC16.88■□□□□ 0.29
USP15Q9Y4E8 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP15Q9Y4E8 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP15Q9Y4E8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP15Q9Y4E8 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USP15Q9Y4E8 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.87■□□□□ 0.29
USP15Q9Y4E8 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP15Q9Y4E8 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP15Q9Y4E8 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms