Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA1Q9UND3 AL691432.1-201ENST00000596308 1422 ntBASIC14.47□□□□□ -0.09
NPIPA1Q9UND3 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA1Q9UND3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA1Q9UND3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA1Q9UND3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA1Q9UND3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA1Q9UND3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
NPIPA1Q9UND3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NPIPA1Q9UND3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.47□□□□□ -0.09
NPIPA1Q9UND3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.47□□□□□ -0.09
NPIPA1Q9UND3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 CICP6-201ENST00000457191 2729 ntBASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 CLK3P2-201ENST00000427566 1453 ntBASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 AP001282.1-201ENST00000531301 1499 ntBASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 AC004987.2-201ENST00000395959 1148 ntBASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 AP005117.1-202ENST00000581724 1908 ntBASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
NPIPA1Q9UND3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.1
NPIPA1Q9UND3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.1
NPIPA1Q9UND3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
NPIPA1Q9UND3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
NPIPA1Q9UND3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
NPIPA1Q9UND3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
NPIPA1Q9UND3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
NPIPA1Q9UND3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 AL365209.1-201ENST00000624418 6473 ntBASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 AC243562.2-201ENST00000561247 970 ntBASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 RAB43P1-201ENST00000561790 589 ntBASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 AL162274.1-201ENST00000617191 1098 ntBASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.45□□□□□ -0.1
NPIPA1Q9UND3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms