Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 AC107918.4-201ENST00000641966 3141 ntBASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 WASH3P-207ENST00000560956 1394 ntBASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 FO538757.1-201ENST00000623083 1397 ntBASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RIMS3Q9UJD0 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RIMS3Q9UJD0 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
RIMS3Q9UJD0 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
RIMS3Q9UJD0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.83□□□□□ -0.03
RIMS3Q9UJD0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
RIMS3Q9UJD0 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 INTS4P1-203ENST00000641008 3683 ntBASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 SLC25A6P4-201ENST00000586535 553 ntBASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 PMS2P7-201ENST00000506558 1336 ntBASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 AP001267.2-201ENST00000532619 2086 ntBASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RIMS3Q9UJD0 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RIMS3Q9UJD0 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.82□□□□□ -0.04
RIMS3Q9UJD0 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIMS3Q9UJD0 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.82□□□□□ -0.04
RIMS3Q9UJD0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIMS3Q9UJD0 AC113367.3-201ENST00000508316 1912 ntBASIC14.82□□□□□ -0.04
RIMS3Q9UJD0 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIMS3Q9UJD0 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIMS3Q9UJD0 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.82□□□□□ -0.04
RIMS3Q9UJD0 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIMS3Q9UJD0 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIMS3Q9UJD0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIMS3Q9UJD0 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.82□□□□□ -0.04
RIMS3Q9UJD0 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIMS3Q9UJD0 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RIMS3Q9UJD0 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIMS3Q9UJD0 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIMS3Q9UJD0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RIMS3Q9UJD0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RIMS3Q9UJD0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RIMS3Q9UJD0 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RIMS3Q9UJD0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.82□□□□□ -0.04
RIMS3Q9UJD0 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms