Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC018665.1-201ENST00000622927 1362 ntBASIC20.74■□□□□ 0.91
NPC1L1Q9UHC9 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC20.74■□□□□ 0.91
NPC1L1Q9UHC9 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPC1L1Q9UHC9 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPC1L1Q9UHC9 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
NPC1L1Q9UHC9 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
NPC1L1Q9UHC9 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC20.74■□□□□ 0.91
NPC1L1Q9UHC9 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NPC1L1Q9UHC9 AL157414.3-201ENST00000624276 1954 ntBASIC20.74■□□□□ 0.91
NPC1L1Q9UHC9 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
NPC1L1Q9UHC9 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPC1L1Q9UHC9 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NPC1L1Q9UHC9 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPC1L1Q9UHC9 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NPC1L1Q9UHC9 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
NPC1L1Q9UHC9 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC20.73■□□□□ 0.91
NPC1L1Q9UHC9 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC20.73■□□□□ 0.91
NPC1L1Q9UHC9 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC20.73■□□□□ 0.91
NPC1L1Q9UHC9 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NPC1L1Q9UHC9 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC20.73■□□□□ 0.91
NPC1L1Q9UHC9 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NPC1L1Q9UHC9 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPC1L1Q9UHC9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPC1L1Q9UHC9 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPC1L1Q9UHC9 LILRP1-201ENST00000444199 1370 ntBASIC20.73■□□□□ 0.91
NPC1L1Q9UHC9 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPC1L1Q9UHC9 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NPC1L1Q9UHC9 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC20.73■□□□□ 0.91
NPC1L1Q9UHC9 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPC1L1Q9UHC9 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPC1L1Q9UHC9 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NPC1L1Q9UHC9 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NPC1L1Q9UHC9 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPC1L1Q9UHC9 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPC1L1Q9UHC9 CELP-203ENST00000624767 2414 ntTSL 5 BASIC20.73■□□□□ 0.91
NPC1L1Q9UHC9 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
NPC1L1Q9UHC9 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 GUK1-206ENST00000366723 845 ntTSL 5 BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 ARSEP1-201ENST00000420443 635 ntBASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 RPL28-203ENST00000428193 573 ntTSL 2 BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 AC022616.1-201ENST00000518688 554 ntBASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 RPL28-207ENST00000558815 616 ntTSL 2 BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 MXI1-205ENST00000393134 889 ntTSL 2 BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 KRT90P-201ENST00000549264 1064 ntBASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 RN7SL48P-201ENST00000579283 293 ntBASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 AL022328.1-201ENST00000610050 478 ntBASIC20.72■□□□□ 0.91
NPC1L1Q9UHC9 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPC1L1Q9UHC9 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC20.71■□□□□ 0.91
NPC1L1Q9UHC9 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPC1L1Q9UHC9 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
NPC1L1Q9UHC9 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NPC1L1Q9UHC9 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPC1L1Q9UHC9 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
NPC1L1Q9UHC9 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPC1L1Q9UHC9 AC008741.2-201ENST00000612792 3115 ntBASIC20.71■□□□□ 0.91
NPC1L1Q9UHC9 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPC1L1Q9UHC9 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPC1L1Q9UHC9 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
NPC1L1Q9UHC9 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC20.71■□□□□ 0.91
NPC1L1Q9UHC9 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC20.71■□□□□ 0.91
NPC1L1Q9UHC9 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
NPC1L1Q9UHC9 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPC1L1Q9UHC9 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC20.71■□□□□ 0.91
NPC1L1Q9UHC9 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC20.71■□□□□ 0.91
NPC1L1Q9UHC9 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
NPC1L1Q9UHC9 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
NPC1L1Q9UHC9 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC20.71■□□□□ 0.91
NPC1L1Q9UHC9 AL355864.2-201ENST00000447420 863 ntBASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms