Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 AC236430.1-201ENST00000402231 743 ntBASIC13.28□□□□□ -0.28
CLN8Q9UBY8 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 SDHAP3-202ENST00000515467 728 ntBASIC13.28□□□□□ -0.28
CLN8Q9UBY8 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 RN7SL204P-201ENST00000582831 262 ntBASIC13.28□□□□□ -0.28
CLN8Q9UBY8 LINC02560-201ENST00000596379 459 ntBASIC13.28□□□□□ -0.28
CLN8Q9UBY8 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 AC008761.3-201ENST00000624803 892 ntBASIC13.28□□□□□ -0.28
CLN8Q9UBY8 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 BNIP3P1-202ENST00000550043 1585 ntBASIC13.28□□□□□ -0.28
CLN8Q9UBY8 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.28□□□□□ -0.28
CLN8Q9UBY8 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CLN8Q9UBY8 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLN8Q9UBY8 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLN8Q9UBY8 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLN8Q9UBY8 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLN8Q9UBY8 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.27□□□□□ -0.28
CLN8Q9UBY8 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLN8Q9UBY8 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.27□□□□□ -0.28
CLN8Q9UBY8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
CLN8Q9UBY8 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.27□□□□□ -0.28
CLN8Q9UBY8 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.27□□□□□ -0.28
CLN8Q9UBY8 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLN8Q9UBY8 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 MRPS18AP1-201ENST00000414458 589 ntBASIC13.27□□□□□ -0.29
CLN8Q9UBY8 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 AC135586.1-201ENST00000539323 574 ntBASIC13.27□□□□□ -0.29
CLN8Q9UBY8 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 AC004233.3-201ENST00000607794 1269 ntBASIC13.27□□□□□ -0.29
CLN8Q9UBY8 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 AC022532.1-201ENST00000624563 1728 ntBASIC13.27□□□□□ -0.29
CLN8Q9UBY8 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CLN8Q9UBY8 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLN8Q9UBY8 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.26□□□□□ -0.29
CLN8Q9UBY8 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLN8Q9UBY8 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLN8Q9UBY8 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLN8Q9UBY8 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLN8Q9UBY8 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.26□□□□□ -0.29
CLN8Q9UBY8 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLN8Q9UBY8 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CLN8Q9UBY8 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
CLN8Q9UBY8 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms