Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AL365209.1-201ENST00000624418 6473 ntBASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PPARGC1AQ9UBK2 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 BCRP1-201ENST00000444246 691 ntBASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 AL109936.8-201ENST00000641772 604 ntBASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 TNRC18P2-201ENST00000417666 2714 ntBASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PPARGC1AQ9UBK2 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PPARGC1AQ9UBK2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PPARGC1AQ9UBK2 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PPARGC1AQ9UBK2 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PPARGC1AQ9UBK2 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PPARGC1AQ9UBK2 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PPARGC1AQ9UBK2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PPARGC1AQ9UBK2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
PPARGC1AQ9UBK2 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 HMGN1P19-201ENST00000436976 333 ntBASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 AC008738.7-201ENST00000609744 511 ntBASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 AL607033.1-201ENST00000623900 1599 ntBASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PPARGC1AQ9UBK2 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms