Protein–RNA interactions for Protein: Q9HCU9

BRMS1, Breast cancer metastasis-suppressor 1, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRMS1Q9HCU9 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.09■□□□□ 0.49
BRMS1Q9HCU9 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.09■□□□□ 0.49
BRMS1Q9HCU9 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
BRMS1Q9HCU9 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.09■□□□□ 0.49
BRMS1Q9HCU9 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.09■□□□□ 0.49
BRMS1Q9HCU9 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.09■□□□□ 0.49
BRMS1Q9HCU9 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.09■□□□□ 0.49
BRMS1Q9HCU9 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.09■□□□□ 0.49
BRMS1Q9HCU9 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRMS1Q9HCU9 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.09■□□□□ 0.49
BRMS1Q9HCU9 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
BRMS1Q9HCU9 AL390754.1-201ENST00000619088 582 ntBASIC18.09■□□□□ 0.49
BRMS1Q9HCU9 AL590560.3-201ENST00000623350 461 ntBASIC18.09■□□□□ 0.49
BRMS1Q9HCU9 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRMS1Q9HCU9 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRMS1Q9HCU9 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRMS1Q9HCU9 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRMS1Q9HCU9 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
BRMS1Q9HCU9 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
BRMS1Q9HCU9 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
BRMS1Q9HCU9 AL161772.1-201ENST00000610494 4412 ntBASIC18.09■□□□□ 0.49
BRMS1Q9HCU9 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
BRMS1Q9HCU9 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRMS1Q9HCU9 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRMS1Q9HCU9 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BRMS1Q9HCU9 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
BRMS1Q9HCU9 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BRMS1Q9HCU9 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
BRMS1Q9HCU9 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BRMS1Q9HCU9 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
BRMS1Q9HCU9 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
BRMS1Q9HCU9 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BRMS1Q9HCU9 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.08■□□□□ 0.49
BRMS1Q9HCU9 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
BRMS1Q9HCU9 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
BRMS1Q9HCU9 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
BRMS1Q9HCU9 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
BRMS1Q9HCU9 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 PMS2P2-201ENST00000425039 1128 ntBASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 AC055876.3-201ENST00000431496 288 ntBASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 ZNF890P-202ENST00000530367 1156 ntBASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 AC138649.4-201ENST00000612222 287 ntBASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 AL109936.8-201ENST00000641772 604 ntBASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
BRMS1Q9HCU9 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRMS1Q9HCU9 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.07■□□□□ 0.48
BRMS1Q9HCU9 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
BRMS1Q9HCU9 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
BRMS1Q9HCU9 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC18.07■□□□□ 0.48
BRMS1Q9HCU9 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRMS1Q9HCU9 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BRMS1Q9HCU9 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRMS1Q9HCU9 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.07■□□□□ 0.48
BRMS1Q9HCU9 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
BRMS1Q9HCU9 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRMS1Q9HCU9 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BRMS1Q9HCU9 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.07■□□□□ 0.48
BRMS1Q9HCU9 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRMS1Q9HCU9 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.07■□□□□ 0.48
BRMS1Q9HCU9 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.07■□□□□ 0.48
BRMS1Q9HCU9 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.07■□□□□ 0.48
BRMS1Q9HCU9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.07■□□□□ 0.48
BRMS1Q9HCU9 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.07■□□□□ 0.48
BRMS1Q9HCU9 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRMS1Q9HCU9 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.07■□□□□ 0.48
BRMS1Q9HCU9 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.07■□□□□ 0.48
BRMS1Q9HCU9 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.07■□□□□ 0.48
BRMS1Q9HCU9 AL844908.2-201ENST00000609461 460 ntBASIC18.07■□□□□ 0.48
BRMS1Q9HCU9 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms