Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 AC074338.1-201ENST00000416825 156 ntBASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 AL079307.3-201ENST00000556114 283 ntBASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 AP001059.3-201ENST00000619053 235 ntBASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 COCH-203ENST00000460581 2688 ntTSL 2 BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UPF3BQ9BZI7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 FO393414.2-201ENST00000405153 598 ntBASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 PKD1P5-201ENST00000532415 10291 ntBASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 AL035456.1-201ENST00000456064 1369 ntBASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
UPF3BQ9BZI7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 AC007686.3-201ENST00000619017 3487 ntBASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 AL080243.2-201ENST00000418783 582 ntBASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.66■□□□□ 0.58
UPF3BQ9BZI7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms