Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRIM62Q9BVG3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM62Q9BVG3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRIM62Q9BVG3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM62Q9BVG3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM62Q9BVG3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.24■□□□□ 0.19
TRIM62Q9BVG3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM62Q9BVG3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 AC092850.2-201ENST00000623821 2697 ntBASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 SOCS2P1-201ENST00000417727 557 ntBASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 CHCHD2P3-201ENST00000603038 451 ntBASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 AC133539.2-201ENST00000604757 467 ntBASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM62Q9BVG3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 AP006294.1-201ENST00000415407 339 ntBASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 AL162726.2-201ENST00000438986 1017 ntBASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 ENPP7P5-201ENST00000541031 1031 ntBASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 AC120045.2-201ENST00000567334 178 ntBASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.22■□□□□ 0.19
TRIM62Q9BVG3 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 158 ms