Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 CICP16-201ENST00000502609 2813 ntBASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 AL391256.1-201ENST00000443260 1855 ntBASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 DUX4L17-201ENST00000557360 1267 ntBASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 AC034105.1-201ENST00000563488 319 ntBASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 AC040169.1-201ENST00000565382 521 ntBASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 AL353135.1-201ENST00000606729 504 ntBASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NDUFAF3Q9BU61 AC148477.5-201ENST00000625164 1645 ntBASIC12.21□□□□□ -0.46
NDUFAF3Q9BU61 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NDUFAF3Q9BU61 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NDUFAF3Q9BU61 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NDUFAF3Q9BU61 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
NDUFAF3Q9BU61 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
NDUFAF3Q9BU61 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.21□□□□□ -0.46
NDUFAF3Q9BU61 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NDUFAF3Q9BU61 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
NDUFAF3Q9BU61 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.21□□□□□ -0.46
NDUFAF3Q9BU61 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 AC108751.1-201ENST00000490852 363 ntBASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 MIR3687-2-201ENST00000577708 61 ntBASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 MIR3687-1-201ENST00000614492 61 ntBASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC12.2□□□□□ -0.46
NDUFAF3Q9BU61 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms