Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 CICP13-201ENST00000422015 2789 ntBASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.21□□□□□ -0.29
PCGF1Q9BSM1 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PCGF1Q9BSM1 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
PCGF1Q9BSM1 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.21□□□□□ -0.3
PCGF1Q9BSM1 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PCGF1Q9BSM1 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
PCGF1Q9BSM1 AC006058.4-201ENST00000624016 1670 ntBASIC13.21□□□□□ -0.3
PCGF1Q9BSM1 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
PCGF1Q9BSM1 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PCGF1Q9BSM1 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PCGF1Q9BSM1 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PCGF1Q9BSM1 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
PCGF1Q9BSM1 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.21□□□□□ -0.3
PCGF1Q9BSM1 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PCGF1Q9BSM1 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PCGF1Q9BSM1 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
PCGF1Q9BSM1 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PCGF1Q9BSM1 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
PCGF1Q9BSM1 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 MIR661-201ENST00000384842 89 ntBASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 SERBP1P5-201ENST00000510079 1181 ntBASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 AL161772.1-201ENST00000610494 4412 ntBASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 KRT8P12-202ENST00000472924 1397 ntBASIC13.2□□□□□ -0.3
PCGF1Q9BSM1 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 AL136982.4-201ENST00000437689 1740 ntBASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 HAUS4P1-201ENST00000406739 1145 ntBASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.19□□□□□ -0.3
PCGF1Q9BSM1 COX20P2-201ENST00000452636 358 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms