Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC005363.2-201ENST00000618631 242 ntBASIC10.41□□□□□ -0.74
LITAFQ99732 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC10.41□□□□□ -0.74
LITAFQ99732 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC10.41□□□□□ -0.74
LITAFQ99732 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
LITAFQ99732 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 PTENP1-202ENST00000532280 3996 ntBASIC10.41□□□□□ -0.74
LITAFQ99732 SF1-209ENST00000433274 2317 ntTSL 2 BASIC10.41□□□□□ -0.74
LITAFQ99732 GOLGA8VP-201ENST00000559009 1798 ntBASIC10.41□□□□□ -0.74
LITAFQ99732 AC055811.4-201ENST00000624039 1754 ntBASIC10.41□□□□□ -0.74
LITAFQ99732 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC10.41□□□□□ -0.74
LITAFQ99732 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
LITAFQ99732 AC015909.5-201ENST00000624336 2266 ntBASIC10.41□□□□□ -0.74
LITAFQ99732 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
LITAFQ99732 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC10.41□□□□□ -0.74
LITAFQ99732 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
LITAFQ99732 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
LITAFQ99732 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LITAFQ99732 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC10.4□□□□□ -0.74
LITAFQ99732 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
LITAFQ99732 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LITAFQ99732 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LITAFQ99732 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LITAFQ99732 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LITAFQ99732 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC10.4□□□□□ -0.74
LITAFQ99732 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LITAFQ99732 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
LITAFQ99732 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LITAFQ99732 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LITAFQ99732 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LITAFQ99732 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
LITAFQ99732 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
LITAFQ99732 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LITAFQ99732 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC10.4□□□□□ -0.74
LITAFQ99732 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC10.4□□□□□ -0.74
LITAFQ99732 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
LITAFQ99732 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LITAFQ99732 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC10.4□□□□□ -0.74
LITAFQ99732 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LITAFQ99732 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
LITAFQ99732 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
LITAFQ99732 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LITAFQ99732 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC10.4□□□□□ -0.74
LITAFQ99732 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
LITAFQ99732 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC10.4□□□□□ -0.74
LITAFQ99732 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC10.4□□□□□ -0.74
LITAFQ99732 AP002383.4-201ENST00000442518 975 ntBASIC10.4□□□□□ -0.74
LITAFQ99732 LINC00265-3P-201ENST00000447588 903 ntBASIC10.4□□□□□ -0.74
LITAFQ99732 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
LITAFQ99732 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC10.4□□□□□ -0.74
LITAFQ99732 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC10.4□□□□□ -0.74
LITAFQ99732 RNF151-202ENST00000569210 853 ntTSL 2 BASIC10.4□□□□□ -0.74
LITAFQ99732 CYB561-216ENST00000582297 897 ntTSL 3 BASIC10.4□□□□□ -0.74
LITAFQ99732 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC10.4□□□□□ -0.74
LITAFQ99732 AL450472.2-201ENST00000603663 1156 ntBASIC10.4□□□□□ -0.74
LITAFQ99732 AL591684.3-201ENST00000605187 298 ntBASIC10.4□□□□□ -0.74
LITAFQ99732 ACTL9-202ENST00000612068 1252 ntBASIC10.4□□□□□ -0.74
LITAFQ99732 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
LITAFQ99732 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC10.4□□□□□ -0.74
LITAFQ99732 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC10.4□□□□□ -0.74
LITAFQ99732 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
LITAFQ99732 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
LITAFQ99732 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LITAFQ99732 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LITAFQ99732 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LITAFQ99732 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC10.4□□□□□ -0.74
LITAFQ99732 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC10.4□□□□□ -0.74
LITAFQ99732 AC138969.3-201ENST00000546612 1459 ntBASIC10.4□□□□□ -0.74
LITAFQ99732 AC138932.2-201ENST00000548268 1459 ntBASIC10.4□□□□□ -0.74
LITAFQ99732 AC126755.4-201ENST00000549796 1459 ntBASIC10.4□□□□□ -0.74
LITAFQ99732 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC10.4□□□□□ -0.74
LITAFQ99732 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LITAFQ99732 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
LITAFQ99732 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LITAFQ99732 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
LITAFQ99732 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC10.4□□□□□ -0.74
LITAFQ99732 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
LITAFQ99732 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
LITAFQ99732 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC10.4□□□□□ -0.75
LITAFQ99732 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
LITAFQ99732 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
LITAFQ99732 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
LITAFQ99732 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.75
LITAFQ99732 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
LITAFQ99732 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
LITAFQ99732 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
LITAFQ99732 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
LITAFQ99732 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LITAFQ99732 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms