Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
C9orf72Q96LT7 AC023024.2-201ENST00000623561 1993 ntBASIC16.17■□□□□ 0.18
C9orf72Q96LT7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 AC013726.1-201ENST00000563747 2285 ntBASIC16.16■□□□□ 0.18
C9orf72Q96LT7 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 AC148477.4-201ENST00000613430 1793 ntBASIC16.16■□□□□ 0.18
C9orf72Q96LT7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 AL627223.1-201ENST00000416693 442 ntBASIC16.16■□□□□ 0.18
C9orf72Q96LT7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 AC098859.1-201ENST00000502915 1238 ntBASIC16.16■□□□□ 0.18
C9orf72Q96LT7 AC079140.1-201ENST00000508039 487 ntBASIC16.16■□□□□ 0.18
C9orf72Q96LT7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 AC093520.2-201ENST00000561830 333 ntBASIC16.16■□□□□ 0.18
C9orf72Q96LT7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 AC007292.2-201ENST00000593524 1812 ntBASIC16.16■□□□□ 0.18
C9orf72Q96LT7 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C9orf72Q96LT7 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 AC005237.2-201ENST00000434368 219 ntBASIC16.15■□□□□ 0.18
C9orf72Q96LT7 AL136982.4-201ENST00000437689 1740 ntBASIC16.15■□□□□ 0.18
C9orf72Q96LT7 AL592309.1-201ENST00000443127 649 ntBASIC16.15■□□□□ 0.18
C9orf72Q96LT7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 AC243562.1-201ENST00000560672 389 ntBASIC16.15■□□□□ 0.18
C9orf72Q96LT7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.15■□□□□ 0.18
C9orf72Q96LT7 AC073389.1-201ENST00000595595 795 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms