Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.72■□□□□ 0.27
TRIM43Q96BQ3 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM43Q96BQ3 TUBB8P8-201ENST00000458717 1058 ntBASIC16.72■□□□□ 0.27
TRIM43Q96BQ3 AC004066.1-201ENST00000502488 802 ntBASIC16.72■□□□□ 0.27
TRIM43Q96BQ3 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.72■□□□□ 0.27
TRIM43Q96BQ3 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.72■□□□□ 0.27
TRIM43Q96BQ3 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TRIM43Q96BQ3 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM43Q96BQ3 AC005324.6-201ENST00000587972 613 ntBASIC16.72■□□□□ 0.27
TRIM43Q96BQ3 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.72■□□□□ 0.27
TRIM43Q96BQ3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.72■□□□□ 0.27
TRIM43Q96BQ3 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM43Q96BQ3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM43Q96BQ3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM43Q96BQ3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM43Q96BQ3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM43Q96BQ3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
TRIM43Q96BQ3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIM43Q96BQ3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM43Q96BQ3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM43Q96BQ3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRIM43Q96BQ3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM43Q96BQ3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIM43Q96BQ3 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TRIM43Q96BQ3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 AL627389.1-201ENST00000413508 1182 ntBASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 RPSAP31-201ENST00000416648 895 ntBASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 ISCA2P1-201ENST00000425548 448 ntBASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 AL353637.1-201ENST00000451571 732 ntBASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 AC087045.2-201ENST00000606279 1003 ntBASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 AL162426.1-201ENST00000624141 743 ntBASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM43Q96BQ3 CLUHP2-201ENST00000426660 1303 ntBASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 AC006449.6-201ENST00000612330 2296 ntBASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 GHSR-202ENST00000427970 912 ntBASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 PUDPP3-201ENST00000445368 636 ntBASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 AC022616.1-201ENST00000518688 554 ntBASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 AC242376.1-201ENST00000559033 726 ntBASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 AC004466.1-201ENST00000599515 1080 ntBASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 AC090164.2-201ENST00000611487 516 ntBASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 AC138466.3-201ENST00000619983 221 ntBASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 AL805961.1-201ENST00000642026 753 ntBASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM43Q96BQ3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM43Q96BQ3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms