Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 PPT1-215ENST00000641471 2368 ntBASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 AP006294.1-201ENST00000415407 339 ntBASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 MEP1AP4-201ENST00000423244 1087 ntBASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 HIST3H2BA-201ENST00000436555 524 ntBASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 AC023310.3-201ENST00000557027 670 ntBASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 AC100756.1-201ENST00000562736 682 ntBASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 AC138749.3-201ENST00000567691 622 ntBASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 AC116165.1-201ENST00000611806 668 ntBASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CLDND2Q8NHS1 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 AL691432.1-201ENST00000596308 1422 ntBASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 AC245100.5-201ENST00000452108 331 ntBASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.34□□□□□ -0.27
CLDND2Q8NHS1 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms