Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 SSR4P1-203ENST00000599569 2260 ntBASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SIMC1Q8NDZ2 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 TSSK5P-201ENST00000423978 907 ntBASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 TARDBPP1-201ENST00000442013 1203 ntBASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 AC067863.1-201ENST00000494933 530 ntBASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 AC010336.2-201ENST00000564226 506 ntBASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 AC090616.6-203ENST00000579186 1945 ntBASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 AC005498.2-205ENST00000593218 784 ntBASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 AL844908.2-201ENST00000609461 460 ntBASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 AL590560.3-201ENST00000623350 461 ntBASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 AC026748.1-201ENST00000624349 3251 ntBASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SIMC1Q8NDZ2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 FO393414.2-201ENST00000405153 598 ntBASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 AC136604.1-201ENST00000418535 575 ntBASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 AC055876.3-201ENST00000431496 288 ntBASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 KRT18P64-201ENST00000434946 1219 ntBASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 AL158211.3-201ENST00000607385 239 ntBASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 AC138649.4-201ENST00000612222 287 ntBASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 AL390754.1-201ENST00000619088 582 ntBASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.78□□□□□ -0.04
SIMC1Q8NDZ2 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SIMC1Q8NDZ2 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SIMC1Q8NDZ2 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms