Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRIM48Q8IWZ4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM48Q8IWZ4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM48Q8IWZ4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM48Q8IWZ4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM48Q8IWZ4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM48Q8IWZ4 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM48Q8IWZ4 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRIM48Q8IWZ4 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 AC105917.1-201ENST00000506637 2539 ntBASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 SLED1-202ENST00000512051 380 ntBASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 AC036164.1-201ENST00000570544 333 ntBASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM48Q8IWZ4 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 AP006294.1-201ENST00000415407 339 ntBASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 MYCLP2-201ENST00000449268 967 ntBASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 KRT17P7-201ENST00000451704 1104 ntBASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 AC123567.1-201ENST00000548294 1261 ntBASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 HNRNPUP1-201ENST00000554987 333 ntBASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 AL596325.1-201ENST00000563991 1082 ntBASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 CHCHD2P3-201ENST00000603038 451 ntBASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 AC093726.1-201ENST00000608064 963 ntBASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM48Q8IWZ4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms