Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AL596442.2-201ENST00000610240 980 ntBASIC14□□□□□ -0.17
LRRC28Q86X40 AC105339.1-204ENST00000636249 355 ntBASIC14□□□□□ -0.17
LRRC28Q86X40 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14□□□□□ -0.17
LRRC28Q86X40 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14□□□□□ -0.17
LRRC28Q86X40 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC28Q86X40 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LRRC28Q86X40 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC28Q86X40 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
LRRC28Q86X40 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC28Q86X40 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LRRC28Q86X40 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC28Q86X40 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC28Q86X40 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14□□□□□ -0.17
LRRC28Q86X40 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14□□□□□ -0.17
LRRC28Q86X40 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC28Q86X40 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14□□□□□ -0.17
LRRC28Q86X40 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14□□□□□ -0.17
LRRC28Q86X40 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC28Q86X40 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC28Q86X40 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14□□□□□ -0.17
LRRC28Q86X40 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14□□□□□ -0.17
LRRC28Q86X40 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LRRC28Q86X40 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRC28Q86X40 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRC28Q86X40 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRC28Q86X40 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.99□□□□□ -0.17
LRRC28Q86X40 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
LRRC28Q86X40 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRC28Q86X40 AKAP8P1-201ENST00000434743 1349 ntBASIC13.99□□□□□ -0.17
LRRC28Q86X40 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LRRC28Q86X40 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRC28Q86X40 AL355306.1-201ENST00000415580 579 ntBASIC13.99□□□□□ -0.17
LRRC28Q86X40 CNN2P11-201ENST00000429351 262 ntBASIC13.99□□□□□ -0.17
LRRC28Q86X40 AC245100.5-201ENST00000452108 331 ntBASIC13.99□□□□□ -0.17
LRRC28Q86X40 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.99□□□□□ -0.17
LRRC28Q86X40 AC092183.1-201ENST00000469884 875 ntBASIC13.99□□□□□ -0.17
LRRC28Q86X40 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRRC28Q86X40 AP000344.2-201ENST00000512987 629 ntBASIC13.99□□□□□ -0.17
LRRC28Q86X40 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.99□□□□□ -0.17
LRRC28Q86X40 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.99□□□□□ -0.17
LRRC28Q86X40 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
LRRC28Q86X40 AC026120.1-201ENST00000611536 926 ntBASIC13.99□□□□□ -0.17
LRRC28Q86X40 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.99□□□□□ -0.17
LRRC28Q86X40 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
LRRC28Q86X40 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LRRC28Q86X40 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRC28Q86X40 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRC28Q86X40 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
LRRC28Q86X40 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRC28Q86X40 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRC28Q86X40 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRC28Q86X40 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
LRRC28Q86X40 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRC28Q86X40 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.99□□□□□ -0.17
LRRC28Q86X40 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRRC28Q86X40 AJ011931.1-201ENST00000618749 2492 ntBASIC13.99□□□□□ -0.17
LRRC28Q86X40 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.99□□□□□ -0.17
LRRC28Q86X40 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LRRC28Q86X40 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRRC28Q86X40 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRC28Q86X40 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRRC28Q86X40 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRC28Q86X40 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LRRC28Q86X40 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRC28Q86X40 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRC28Q86X40 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRC28Q86X40 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRC28Q86X40 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.98□□□□□ -0.17
LRRC28Q86X40 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.98□□□□□ -0.17
LRRC28Q86X40 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRC28Q86X40 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.98□□□□□ -0.17
LRRC28Q86X40 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
LRRC28Q86X40 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRC28Q86X40 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
LRRC28Q86X40 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRRC28Q86X40 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.98□□□□□ -0.17
LRRC28Q86X40 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.98□□□□□ -0.17
LRRC28Q86X40 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRC28Q86X40 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRC28Q86X40 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRC28Q86X40 TFAMP1-201ENST00000412727 736 ntBASIC13.98□□□□□ -0.17
LRRC28Q86X40 ADH5P3-201ENST00000433842 1137 ntBASIC13.98□□□□□ -0.17
LRRC28Q86X40 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRRC28Q86X40 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
LRRC28Q86X40 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.98□□□□□ -0.17
LRRC28Q86X40 RARRES2P8-201ENST00000566335 367 ntBASIC13.98□□□□□ -0.17
LRRC28Q86X40 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.98□□□□□ -0.17
LRRC28Q86X40 AC021097.1-201ENST00000607902 574 ntBASIC13.98□□□□□ -0.17
LRRC28Q86X40 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.98□□□□□ -0.17
LRRC28Q86X40 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRC28Q86X40 AL513210.1-201ENST00000629608 234 ntBASIC13.98□□□□□ -0.17
LRRC28Q86X40 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
LRRC28Q86X40 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
LRRC28Q86X40 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRRC28Q86X40 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRC28Q86X40 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRRC28Q86X40 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRRC28Q86X40 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRRC28Q86X40 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.98□□□□□ -0.17
LRRC28Q86X40 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms