Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 FAM86C2P-203ENST00000528684 1004 ntBASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 C20orf181-201ENST00000623918 480 ntBASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM53Q6P2H8 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.46□□□□□ -0.1
TMEM53Q6P2H8 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
TMEM53Q6P2H8 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC14.46□□□□□ -0.1
TMEM53Q6P2H8 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TMEM53Q6P2H8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TMEM53Q6P2H8 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TMEM53Q6P2H8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TMEM53Q6P2H8 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TMEM53Q6P2H8 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TMEM53Q6P2H8 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
TMEM53Q6P2H8 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.46□□□□□ -0.1
TMEM53Q6P2H8 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 YBX2P1-201ENST00000394192 760 ntBASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 BX842568.4-201ENST00000421222 227 ntBASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 ACTG1P14-201ENST00000446382 1122 ntBASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 POU5F1P6-201ENST00000466990 990 ntBASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 RARRES2P8-201ENST00000566335 367 ntBASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 AC087386.2-201ENST00000623212 4637 ntBASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.45□□□□□ -0.1
TMEM53Q6P2H8 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 AL390755.1-201ENST00000623716 2027 ntBASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 MKNK2P1-201ENST00000437526 628 ntBASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.44□□□□□ -0.1
TMEM53Q6P2H8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms